Puccinia triticina (wheat leaf rust): PtA15_3A580
Help
Entry
PtA15_3A580 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ptrc03110
]
PtA15_3A580
Chaperones and folding catalysts [BR:
ptrc03110
]
Heat shock proteins
HSP100
PtA15_3A580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_18
AAA_7
IstB_IS21
Mg_chelatase
ABC_tran
TIP49
RNA_helicase
AAA_28
AAA_24
T2SSE
NACHT
HIP1_clath_bdg
KIF9
Torsin
APS_kinase
Rx_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
77808456
NCBI-ProteinID:
XP_053018766
LinkDB
All DBs
Position
3A:complement(join(5442053..5442436,5442527..5442899,5442975..5443077,5443147..5443484,5443557..5443747,5443820..5444552,5444623..5444728,5444824..5444986,5445113..5445463))
Genome browser
AA seq
913 aa
AA seq
DB search
MSASAGFSFTDKTNDALTTAIGLARERSHVHVQPIHIALALLDPTVIGTNGGTGSAGGDC
LFANVLDKAGADAREITRALNKRLVREPSQDPPPDQVGFSSSSTKVLKEAQKLMRQQNDG
YIAQDHLILALLDDSVIKQIFKEANVSDQGIRTAISAVRAGRKVDSKSAEEGFDALRKYA
IDLTEKARENLLDPVIGRDNEVRRCIRILCRRTKNNPVLIGEPGVGKTAIAEGLAQRMVN
RDVPASLIGRLFALDLGAIQAGASYKGQFEERIKSILNEVEKATEKGENIILFIDEMHLI
MAGQGASSGGMDAANLIKPVLARGKLRCLGATTLAEYRKYIEKDAAFERRFQQVIVNEPS
VPETISILRGLKEKYETHHGVTILDNAIVTAATLAHRYLTARRLPDSAIDLVDEAAAAVR
VTRDSQPEAVDRLERKKLQIEVEAHALAKEKDDESKTRLEAVNQEIAAINDELQPLKAAW
EAAKSRGDKIRAVREKIDSLKAKAEDAERRYDVSTAADLRHYAIPDLEEQLSLLEAHKRT
EDAKRGPSELEDDVVTSDGISEIVARWTGVPVSRLKATEKVKLRMMEKALMKQVVGQPEA
VKAVADSIRLSRSGLSNESRPIASFLFCGPSGTGKTLLTKALAKFLFDSEEAICRIDGSE
YSEKHSISRLIGSPPGYVGHEEGGTLTEWVRRKPYSIVLIDEIEKASREFSQLFLQVLDD
GRLTDSQGRVISFRNCVIVMTSNLGAAFLNELEDDSHIPDSTRSLVHGAIRSHFAPEFIN
RIDATIIFNKLGTAQIRSIVDVRLAEIQKRLHINGKNIQLEIDDQARNWLGQAGFNPQYG
ARPLNRTIQNELLHPLSRMILDERIRDGEAARITADWKLNRLVIFPNHEALAMDIDEEQD
VLSDDEIKIEDVN
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctagcgctggattttcctttaccgacaaaactaacgatgccctcactaccgcc
atcggtctcgcccgtgagcggtcccatgttcatgtccaacccatccatatcgctctcgcc
cttctcgatccaaccgtgatcgggaccaacggcggtaccggttcagccggcggcgattgt
ctgtttgcaaacgtccttgacaaggccggcgctgacgcccgggaaattacacgggctctc
aacaagcgcttggttcgtgagccgagtcaagacccaccccccgatcaagttggcttttcg
tcctcctcaaccaaggtcctcaaagaggctcagaaactgatgaggcagcagaacgatgga
tacattgctcaagatcatctcatactcgccctgctcgatgattccgtaatcaagcaaatt
ttcaaagaagccaatgtttccgatcaaggcatccgaactgcaatctccgccgttcgagct
ggccgcaaggtcgacagcaaaagcgccgaggaaggatttgatgctcttcggaaatacgct
atcgatttgaccgagaaagcacgagaaaatctgctggacccggtcatcggacgggataac
gaggttcggcgctgtatcagaatcttatgccgtcgtaccaagaacaacccggtcctcatt
ggtgaacctggcgtcggaaagacagcgattgccgaaggcttagctcaacggatggtcaac
agagatgtgcctgcatcactaatcggacgattattcgctctggacctgggtgccattcag
gccggcgcaagctataagggccaatttgaagagagaatcaaatcaattctcaatgaagta
gaaaaagccaccgaaaagggcgaaaacatcatcctattcattgacgagatgcatctgatc
atggccggtcaaggcgctagttccggcgggatggatgctgcaaatctcattaagcctgtc
ttggctcgaggcaaactccgttgtctaggtgccactacccttgcggaataccgcaagtac
attgaaaaagatgcggccttcgaacgcagatttcagcaagttatcgtcaatgaaccctca
gtacccgagacaatttcgatccttcggggtctaaaagagaaatacgaaactcaccatggt
gtcaccatcctcgacaatgctatcgtcactgccgccactcttgctcaccgatacctaacg
gcccgtcgattgccagatagcgctattgatctggttgatgaagcagcagctgctgtgcga
gttacaagggacagtcagccagaagctgtcgacagactcgagcgtaagaaacttcagatt
gaagttgaagctcatgccttggcaaaggaaaaagatgatgagagcaaaaccagactggag
gccgtgaatcaagaaatcgctgccatcaatgacgaattacagcctctcaaagccgcttgg
gaagctgccaagtcgcgtggtgacaaaatcagagctgttcgagagaaaatcgattctttg
aaagccaaagcggaagacgcggagaggcggtacgatgtatcaactgccgccgatctacgt
cactacgcaatcccagacttagaagagcaattgtctctcctagaagctcacaagcgaacg
gaagacgctaagcgagggccatccgagctggaagatgatgtcgtgaccagtgacggaatt
tccgagatcgtggcccgttggactggggtccccgtttcacgcctgaaagccacggagaag
gtcaaactcagaatgatggaaaaggcactgatgaaacaagtagttggtcaacctgaagcc
gtcaaggctgtggctgattccatccgactcagtcgcagcggtctgtccaacgaatcacgc
ccgatcgcctccttcctattttgcggtccttccggaaccggcaaaacgctcctgactaaa
gcactggccaaattcctctttgacagcgaagaggcgatttgtcggatcgatggaagcgaa
tactctgagaaacatagcatcagtcgacttatcggcagtccacccggctacgtgggccac
gaagaaggcggaacattgactgaatgggtccgtcgaaaaccatacagtattgtgctgatc
gacgaaatcgagaaggcgtcccgagaattcagccagttgttccttcaagtcctcgatgac
ggtcgtctgaccgacagtcaaggaagagttatcagcttccggaactgtgtgatcgtgatg
acgagcaacttgggcgccgctttcctcaacgaacttgaagatgacagtcacatccctgat
tcaacccggtctttggttcacggagccattcgctcacactttgctcctgaattcatcaac
cgcattgatgccacaatcattttcaataagctcggcacagcacaaatcaggtcgattgtc
gatgttcgactggccgaaatccaaaagagactacacatcaacggcaagaacatccagcta
gagatcgatgaccaagcgcgcaactggctcggacaagctggcttcaacccgcaatacggt
gcccgaccactcaaccggacgatccagaatgaactccttcaccccctctcacggatgatt
ctggatgaacggattcgggatggcgaggctgctcggatcactgcagactggaaactcaat
cgtctcgtcatcttccccaatcatgaagctttggctatggatatcgatgaggaacaggat
gtactttcagatgatgagatcaagatcgaagatgtcaattaa
DBGET
integrated database retrieval system
