KEGG   Puccinia triticina (wheat leaf rust): PtA15_3A779
Entry
PtA15_3A779       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PtA15_3A779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptrc03041]
    PtA15_3A779
Spliceosome [BR:ptrc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    PtA15_3A779
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_Aladin WDR90_beta-prop_4th PRP4 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_like Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_HPS5 RMC1_N WDR54 Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8
Other DBs
NCBI-GeneID: 77808675
NCBI-ProteinID: XP_053018964
LinkDB
Position
3A:join(7138225..7138740,7138813..7138987,7139387..7139510,7139597..7139917,7140013..7140419,7140505..7140584)
AA seq 540 aa
MEVDFDDLVTKQFDPNDPNQTRTQAEHAALLTSLDRATRSRQLAVPTNEVAIRVRLRELG
EPMTLFGERPEDRRDRLRYVLSQIAEAKGWELEKDAGAGQDEGGADGKDDSDLDDEEEFY
TEGSEALLVARRSIADFSLANARKRISRQKLEAKLPLSKIMATRKSVYAELKTYTNLGSQ
VGDERPISIVRFSPNARLLATGSWTGTAKVWNVPSCTPYAESKESKNIFRGHSDRIGGLA
WHPGATLSQSTSSANFITGGADAKVQVWSLDNEQPLRTLEGHGARVCRVAFHPAGRHVAS
SSFDTTWRLWDVETGAELLVQEGHSREVYSLEFQADGALLCSGGLDAIGRVWDLRSGKTV
MVLDGHVKDILAIDFSPNGHQIATGSNDDNIRIWDIRTLKAIYTIPAHTSAVSDVKFYRA
PAVPGFKFPYTIDVEGKTKDEKQSAAAYLNGSDRIKLEEGEPVENEVEVPLGGLYLASCG
YDGYVKLWSADDWQLIKAMSSEAGGRVMSVDVGSDGKFMASGEWTRTFKLWSAENVSLSL
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggaagtcgacttcgacgatctggtcaccaagcagttcgatccaaatgacccaaaccaa
acacgaacccaggcggaacatgcagccctacttacttctctcgaccgggccacccgatcg
aggcaactcgcagtgcctacgaatgaggtcgcgattcgagtcagactacgagagcttggc
gagcctatgacactctttggcgaaagacctgaagacagaagagatcgactacgctacgtg
ttgagtcaaatcgctgaagcaaagggctgggaactcgagaaggacgccggggctggacaa
gacgaaggaggtgccgatgggaaagacgactccgatttggacgatgaagaggaattctat
accgaaggatctgaggctctcttggtggctcgaagatctattgccgatttcagtctggct
aatgcccgaaaacgaatttcgcgtcaaaagcttgaagctaaacttccactcagtaagatc
atggccactcgaaaatcggtttatgccgaactcaaaacatataccaatttaggatcccag
gttggcgacgaacgaccgatttcaatcgttaggttctcgcccaatgctcgtcttttagcc
accggctcctggaccggtacagccaaggtttggaacgtcccaagttgtactccctatgcg
gagagcaaagaaagtaaaaacattttcagaggtcactccgatcgaatcggtggtctggct
tggcatcccggtgccactctcagtcagtcaacatctagtgcaaacttcatcactggaggt
gcggatgcaaaagtccaagtttggtcgctagacaatgaacagcctcttcgaactctggaa
ggacatggtgcacgagtttgtcgtgtcgcttttcatcctgcggggcgacatgtagcgtct
agttcgtttgataccacttggcgtctttgggacgttgagacgggtgccgaacttctggtt
caagaaggtcattcacgagaagtctacagtctggaattccaggccgatggcgcattgctg
tgttccggtggcttggacgccattggtcgggtatgggatctgcgaagtggtaagacagtg
atggtacttgatggacatgtcaaggacatccttgctatcgacttttctccaaatggtcac
cagattgcaactggatcaaatgatgacaatatcaggatatgggacatccgtacactcaaa
gcaatctacaccattccagcccacacctcagcagtctcagatgttaaattttatcgggca
ccagcagtgccaggcttcaagttcccatatacgattgacgttgaagggaagacgaaggac
gagaaacagagcgcagcagcatatctcaacggctcggaccgaatcaaacttgaggaaggc
gagccggtggaaaacgaagtcgaggttcctctgggcggtttatacctggccagttgtggt
tatgatggttatgtgaaattgtggtctgctgatgattggcaattaatcaaggccatgtcg
agtgaagctggggggagagtaatgagtgtagatgttggcagtgatggaaaatttatggct
tctggagaatggacaaggacatttaagctctggtcagccgaaaacgtttcgttgtcgctg
tga

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