Puccinia triticina (wheat leaf rust): PtA15_4A185
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Entry
PtA15_4A185 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14307
nucleoporin p58/p45
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PtA15_4A185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_4A185
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PtA15_4A185
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nup49_C
FBF1
Motif
Other DBs
NCBI-GeneID:
77808938
NCBI-ProteinID:
XP_053019292
LinkDB
All DBs
Position
4A:complement(join(1647166..1647371,1647466..1647772,1647852..1647954,1648069..1648170,1648275..1648666))
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AA seq
369 aa
AA seq
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MFGALNSSTSAAPSSGGLFGAIKPQNSGNIFGTSSTTSGGLFGASTTTSTPQTTGNLFGS
STTTTSTPQTGLFGSSNQPATGQQTGTNLFGASNQNTSSTNLFGSNNTNTNATGNPFGTK
ASSVPVTPAPSGVGNGVSQSNPVFTRTTRFNDLPEDAKKQLEALDAMIQSQCRHSDTLKA
MQLGTEITEGTSLLRQVTSEMHVTSASVKNSAKLLDSIRQSIDGEVADLLNLAAIVDAHH
SQRMTAGAHNTGESLPNPLKFQFEFFSQKAADMEERMKRYRQTIDYVELQLKGLFDRPSP
ASIVPALKAQYSTFMALADKVAQLDAALTLLKEEYRDIWRHQTGSVRDPFAEIDQAFGLG
TSTNTFQTG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagcgttaaactcatccacttcagccgccccatcttcaggtggtctcttcggt
gcgatcaagccgcaaaactcgggcaacatcttcggaacctcttcaactacatctggaggg
ctgttcggcgcgtctacaaccacttcgacacctcaaaccactggaaacttgtttggatcg
tcgacaacgaccacttctactccccaaacgggactgttcggtagctctaaccaaccagca
actggccaacagacaggaactaatctcttcggggcttcgaatcaaaatacatcatccact
aacttgtttggatcgaataacactaacactaacgcgactggtaacccgtttggtaccaag
gcatctagtgtccctgttacacctgcaccatctggagtcggcaatggcgtatctcagagc
aacccggtgttcacgcgcactacgcgcttcaatgacctacctgaagatgcgaaaaagcaa
ctggaagcgctagatgctatgatccaatcgcaatgtcgtcactcagatactctaaaagca
atgcagctagggaccgaaataacggagggaacctcactactgcgtcaagttacatcggaa
atgcatgtcacttccgcctccgtgaaaaattcggcaaagttacttgattcaattcgacaa
tctatcgatggagaagtggctgatttgcttaacctggcggcaattgtggacgcccatcat
tctcaacgcatgactgctggtgcccacaatactggagaatcgttaccaaatcctttgaag
tttcagtttgagtttttctcccaaaaagcggccgacatggaggaacggatgaaacgttat
cggcaaactattgattacgtcgaattacaattgaaaggactttttgatcgacctagccct
gcgtccatcgtacccgctttaaaggctcaatattctacattcatggctctggccgacaaa
gtagctcagttggatgcggctttaacccttctgaaagaggaataccgagacatttggagg
catcaaaccggatctgttcgtgatccattcgcagaaattgatcaagctttcggacttggt
acttcgacaaataccttccaaaccggataa
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