Puccinia triticina (wheat leaf rust): PtA15_4A300
Help
Entry
PtA15_4A300 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03030
DNA replication
ptrc03410
Base excision repair
ptrc03420
Nucleotide excision repair
ptrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PtA15_4A300
03410 Base excision repair
PtA15_4A300
03420 Nucleotide excision repair
PtA15_4A300
03430 Mismatch repair
PtA15_4A300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrc03032
]
PtA15_4A300
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_4A300
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_4A300
DNA replication proteins [BR:
ptrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PtA15_4A300
DNA Replication Termination Factors
ELG1-RFC complex
PtA15_4A300
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PtA15_4A300
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PtA15_4A300
Check point factors
HRAD17(Rad24)-RFC complex
PtA15_4A300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
AAA_22
Rad17
ABC_tran
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
77809066
NCBI-ProteinID:
XP_053019406
LinkDB
All DBs
Position
4A:join(2482162..2482198,2482359..2482428,2482523..2482691,2482802..2483203,2483320..2483478,2483546..2483831,2483944..2484008)
Genome browser
AA seq
395 aa
AA seq
DB search
MCEVILLFGPWLPLCFESSVDPVLCQVPIKLATTTMSLLVDKYRPKKLEELDYHQGLSDR
IRALAKTADFPHCLFYGPSGAGKKTRIAATLTELFGPGAQKLRIDQKVFVTPSRRRLDVQ
VVQSNYHLELTPSDVGQWDRSVVQDVLKEVGQSAQLDSGATQRFKVVVIHGADELTNDAQ
AALRRTMERHTSTMRLILCANSTAKIIGPIRSRCLLLRVGAPNPEQIAQVLNNVSNKALF
ATSLPDETAMAIALSSNGNLRRALLTLDAVRAQDETFSKSRASPDSIPRPDWEVYIDKLA
GVIAKEQSPDKLLEARAMLYELLVHLIPPSVVIVQLAKGLLTRVDDALRPEIIHWAAWYE
HRLRLGNKPIFHLEAFVAKVMSLYKNYSIGLHDFI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagtaattctcctcttcggaccatggcttcctttgtgcttcgagagttcagtc
gatccggtcttgtgtcaggtgccaatcaaactcgctaccaccaccatgtcgctgttagtg
gacaagtaccgaccgaagaaactcgaggagttggattatcatcagggattgtccgatcgg
attcgtgcgttagcaaagacggccgacttcccccactgtctattctacggcccaagcggt
gccgggaaaaagacccgaattgctgctacactaaccgaacttttcggacctggggcgcag
aaattaaggatcgatcaaaaagtctttgtaacaccatcacggcgtcgattagatgtccaa
gtggtacagtcgaactaccatctcgaactgacaccatcagatgtcgggcaatgggaccgg
agcgtggtccaggacgttttgaaggaagtcggacaaagtgcccaactcgatagcggggcc
actcagcgattcaaagtagtcgtcattcacggggcggatgaacttacaaacgatgcgcag
gctgctctgcggcgtacaatggagcgccatacctcaaccatgcgcttgattctctgtgcc
aattccactgctaaaataatcggcccgatccgaagtcgttgtctgctacttcgagtagga
gcccccaatccagaacaaattgctcaggttttgaataatgtatctaataaagctttgttt
gcaaccagtttaccggatgaaactgcgatggccattgccttgtcttcgaacggtaacctg
aggagggctcttttaacattggatgcggttcgagcacaagatgagacattttccaagagt
cgcgcgtctcccgatagtatccctcgacctgattgggaagtttacattgataaactggcc
ggcgtgatcgcgaaggaacagtcgccggataagttattggaggcccgggcaatgctttat
gaactcctcgtgcacctcattcctccttcagttgtcatcgtccagcttgcgaagggtttg
ttaactcgagtcgatgacgctctcagacctgagatcatccattgggccgcttggtacgaa
caccgactcagattaggcaataagcccatcttccaccttgaagctttcgtggcgaaggtg
atgtcactttacaaaaattacagtattggattgcatgattttatataa
DBGET
integrated database retrieval system
