Puccinia triticina (wheat leaf rust): PtA15_4A816
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Entry
PtA15_4A816 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_4A816
Spliceosome [BR:
ptrc03041
]
Common components
Common spliceosomal components
General mRNP proteins
PtA15_4A816
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_7
RRM_5
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
77809634
NCBI-ProteinID:
XP_053019918
LinkDB
All DBs
Position
4A:complement(join(7704283..7704426,7704542..7704716,7704809..7704899,7704973..7705108,7705174..7705255,7705330..7705503,7705592..7705807,7705887..7706042,7706112..7706195,7706271..7707187))
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AA seq
724 aa
AA seq
DB search
MSQYEAGRAPVGCYRIQGPGGPSLAPVAAGGVSLLRSPPCGSLGRGGWRLSASIRQRSGK
QPIDILGKTQSVELTQAEKNQTLALMKPLEEAAPAPADTESVAKTGVDNGAESEEIRTPT
GHADGVDGEGKNETGSAPRSHRSKKLPDRSPGKDSDIRSHSSRSHRKHRSRSRETTERSH
TDRSRHRERDRRDRDRERDRNRDRHRERGDRDSRGDRDSRGDRDSRGDRDSERDRERDRE
REKDRARERDPKRSHRSRDLDEDRDRHRKRQRSRSRERSKEPRSRDVDDRESERQRRFEE
AEGEDRRRRPDRRSPRYRPYEPTGSPPRRSSSPHLTEEEHEMRSVFVSQLSARVGDRELF
QFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESVQKALALTGTKLLGLPVMVQYTE
AEKNRQAMANTQPNVPPGFVATAPAPPVLRPFVAPKARGPGPNDPNSYARLYVGSLNFNL
TDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNATEKMNGFQLAGRAL
RVEIKAQPPAALLNATAPGVANPAMVTPAVGNFAAPAPSNFEERLEDPIGGNLNQISRVE
LMHKLARTEQPTNVPVTDMFRPNIPTATSRSVLLKNMFNPEEETEQGWDIELRDDVKGEC
EEKYGPVLAIAIEKESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITAAFISDALVAA
HGGK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtacgaggctggaagggctcctgtcggctgctaccgtatccaggggccaggg
ggtccttctctagcccctgttgccgcgggaggggtctccctcttgcgtagccccccctgt
ggttcgctggggagggggggctggcgactttctgcttccatccgtcaacgttccgggaaa
cagcccatcgacatcctcggaaagactcagtcagtcgaactcactcaagccgaaaaaaac
caaacacttgccctcatgaaaccactggaagaagccgcgcccgccccagccgacaccgag
agcgtggccaagaccggggtcgacaacggagccgagagcgaggagatcaggactccgact
gggcatgccgacggggtagacggcgaggggaagaacgagacaggcagcgctccgaggagc
caccgctccaagaaactgcccgatcgctctcctggaaaggactcagatatccgaagtcat
agtagtcggagccataggaaacaccgctctcgctctcgtgagaccactgaaagaagccat
actgatcgtagcagacaccgagagcgtgataggcgtgacagagaccgcgagcgagacagg
aaccgagaccggcaccgagagcggggagatagggattcgcgaggagatagggattcacga
ggagatagggattcgcgaggagatagggactctgaacgggaccgcgagcgggatagggag
cgagagaaagatcgagcgcgggagcgggacccgaaacgcagtcatcggtcccgcgacctc
gacgaggacagggaccgccatcgcaagaggcagcgtagcaggagtagggagcgatctaaa
gagccacgctcgcgggatgtggatgacagagaatctgagcgacagaggagatttgaagag
gctgagggcgaagacagacgtcgccgcccagatcgccgaagtcctcgctatcggccctat
gagcccactggctcacccccacggaggtcctcgagtcctcatctaacagaggaagaacat
gagatgcgttctgtttttgtctctcaactttctgctcgtgtgggcgatcgcgaactcttt
caattcttcgagcaacaggccgggaaagttcgcgatgccagattgatcactgatcgtatc
tcccgtcgatccaaaggagtcggatacgtagaatttcgtgaattggaaagtgttcagaaa
gcactggcactaactggaactaaattgcttggtctgccagtcatggtccaatataccgaa
gcagaaaaaaaccgtcaagccatggccaatactcagcccaatgtgccgcctggatttgtg
gccacggctccagccccacctgttctccggcccttcgttgcccccaaagccaggggaccg
ggtccgaacgatcccaacagctacgccagactttatgtgggctcactgaatttcaatctt
acagatgacgatattcgacaggtcttccaaccctttggtgatatcgaatacgtcgacctt
cacagagatcagatcactggcaagagtaaaggatatgcctttgttcagttcaaaaacatg
catgatgcaaaaaatgcaaccgaaaaaatgaatgggttccagttggctggtcgtgccttg
cgagttgagatcaaagctcagcccccagctgccctgctgaatgccaccgcacccggtgta
gccaatccagccatggttacccctgcggtaggcaactttgccgcccctgcacctagcaat
ttcgaagagcgcttggaagacccaattggtggtaacttgaatcaaatctcccgcgtcgag
ttgatgcacaagctcgcgaggacagaacagccgaccaatgtcccagtcaccgacatgttc
cgcccgaatattcccacggctacgtcgcgctcagtgctcttgaaaaacatgttcaatccg
gaggaagagaccgagcaaggatgggacatcgagctccgcgacgatgtcaagggtgaatgc
gaggagaaatacgggccagtcttggccatcgcgatcgagaaagaatccaccgctggcgat
atctatatcaccttcgattccgtgccttccgcccaaaaggcaatcactgggctcaataat
cgctggttcggcggccgccaaatcaccgccgcttttatatctgatgcactcgtcgctgct
catggaggaaagtaa
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