KEGG   Puccinia triticina (wheat leaf rust): PtA15_4A879
Entry
PtA15_4A879       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K15361  WD repeat-containing protein 48
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    PtA15_4A879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_4A879
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     PtA15_4A879
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 Beta-prop_TEP1_2nd WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SPT8 WDR54 WD40_RFWD3 Beta-prop_SCAP WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 77809703
NCBI-ProteinID: XP_053019981
LinkDB
Position
4A:join(8441045..8441063,8441091..8441195,8441396..8441680,8441751..8441958,8442025..8442569,8442885..8443106,8443206..8443415,8443495..8444851,8444935..8445013,8445224..8445433)
AA seq 1079 aa
MRFSISRASGGLGAGRARFQAEKPCARGGIPGEAGDPTPSFTTFHQKPAFTKTTTHHHTT
QPKHPTHALPITTLAIDHTTPIRNPLNPQGILYAAGRDGLISAWELNQHKQASFRQAIQP
HTHWINDLILCNQNQTIISASSDRTIKAWNPHSPQHALCPATIGTHLDYVKCLAHSPKAA
WVASAGLDRTILLWDTNEARPNPLGEFSENLVGTSIYSLATTPAGQLLAAGSPAQAIALY
DPRLATQLAKLVGHTDNVRAILLADDATRLLSASSDATVKMWDLRSQQRCLHTFAHHSTS
VWALHSQHPALEIFYSADRAGWLCKLDLEGSDDFRDGQCIVLAHARQSRSHHQQGINSIL
AFDNFVWTASASSSIERWADIPTRIQRPLVPLFSQFDHLLPNADHQDPESITIHSPKSDA
SIPRRPSHHHIHSTMSSLSLRPPTHPGLEPVKLHSPLTIDATIPLRSSPVDLILGCSGLI
KSELLNDCRHALTIDTSGRIALWDIISCTCQGIFDPDELERELDHGSSAGSSGSNYTPSE
LLKLVKERIEGQATIGTWCTVETQTGLLTVHLDEQRCFDGEVYADEAGLAEEVLELMKED
HRLCLGRWVLRNLFDGFINHHVQLRLRNENPTTPSAATDAANPGQTAESDEQQQNKKIYL
PGRPFVPHTPGMTIALATPALTPAILPDLKTLTGPKNQQAADHSADYFSLPRLMEADEEQ
LGSEALTPGGGGGAGGGGGGGGLDSSTDASSSYTSSVYPLPSPRRASPVPVTTTQDGLPR
DDKTPMTESPAASWSSTTSSAAAPPPPNSANIFSRFRSLGRGQKRRGSSDPAAPPVISNP
IPYREDGDQAELDGQRLLMLEKAKAQQALVVQAVLAQPFEPCGPLDAPALMLPPDTTILV
SEEEPQSGGWEVAYRGLVATTELDAEVLMDVLPGWILGFLLANRISNKEGGASTTTTTTT
VKVTFVLQPEGGREAAGLPELPNGNARLTASRVLRMKKVAAYVAQKLDPAGSEQGTLTPT
STSGPNPRLPAVDESLIVLSCNGQDLPRTLSLGVVKQWVWAQPGDVVICYRRQGLAPSA
NT seq 3240 nt   +upstreamnt  +downstreamnt
atgcgcttttcgatatctcgagcatccggcggactgggagcaggccgggcacggttccag
gcggagaagccctgtgcccgcgggggtatccccggggaggccggggaccctacgccgagc
ttcacaacattccaccagaaaccagcattcaccaaaacaacaacacaccaccacacaacc
caaccaaaacaccccacccacgcactccccatcaccacactcgccatcgaccacacaaca
cccatcagaaacccactcaacccccagggaatactctacgcagcgggcagagacgggctg
atcagcgcatgggaactcaaccagcacaaacaagccagcttcaggcaagccatccaacca
cacacccactggataaacgacctcatcctatgcaaccaaaaccaaaccatcatctcggcc
tcatccgaccgcaccatcaaggcatggaacccacactcaccccagcacgcactctgccca
gcaaccatcggaacacacctcgactacgtcaagtgtctcgcacacagccctaaagctgcc
tgggtcgccagcgcaggcctcgaccgaaccatcctgctctgggacaccaacgaagccaga
ccgaacccactgggcgaattctcagagaacctcgtcggcacctccatctactcactcgcc
accacccccgccggacagctgctcgccgccggatcccccgcccaggccatcgccctctac
gaccccaggctggccacacagctcgccaagctcgtcggccacaccgacaacgtccgcgcc
atcctcctcgcagacgacgccacacgcctgctctcggcctccagcgacgccaccgtcaag
atgtgggacctgcgcagccagcagcgctgcctccacaccttcgcacaccactccacctcc
gtctgggccctccacagccagcaccctgccctcgagatcttctactccgccgaccgcgcc
ggctggctctgcaagctcgacctcgaaggctcagacgacttccgcgacggccagtgcatc
gtcctcgcacacgcccgccagagtaggagccaccaccagcagggcatcaacagcatcctc
gccttcgacaactttgtctggaccgcatccgctagctcgtccatcgagcgctgggcggac
atccccacccgcatccagcgccccctcgtcccgctcttctcccagttcgaccatctgctc
ccgaacgcggaccaccaggaccccgaatcgatcacgatccactcccccaaatccgacgcc
agcatccccaggcgccccagccatcatcacatccactcgaccatgtccagcctcagtcta
cgcccgcctacccaccctggcctcgagcctgtcaagctccattcgcccctcaccatcgac
gctactatccctctgcggagctcgcctgtcgacctcatcctgggctgctcgggcctgatt
aagagcgagctgctcaacgactgtcgacatgctctgacgatcgataccagtggtcggatc
gccctctgggacatcatcagctgtacctgtcagggcatcttcgaccctgacgagctggaa
cgcgaactcgaccacgggtcctccgcgggctcctctggttccaactacacgcctagcgag
ctcttgaaactggtcaaggagcggattgagggccaagcgacgatcggcacctggtgcaca
gtggagacgcagaccggacttctgacggtccatctggacgagcagcgatgcttcgacggc
gaggtgtatgccgacgaggccgggctggccgaggaggtgctcgagctgatgaaggaggac
catcggctctgcttgggtagatgggtgctgaggaacttgttcgacggcttcatcaaccat
catgttcagcttcgtctccgcaacgaaaaccccactaccccgtcggccgccactgacgct
gccaacccaggacagacagccgaatctgacgagcagcagcagaacaagaagatatatctc
cccgggaggccgtttgttccgcacacgcctgggatgaccatcgccctcgccacccccgcc
ctcacgccggccattctccccgacctcaagactctcacggggccgaagaaccaacaggcc
gccgaccactcggctgattacttctcgctcccacgtctgatggaggctgatgaagagcag
ctgggctcggaagcgctcacgcccggtggtggcggtggtgctggtggcggaggcggaggc
ggaggcctggactcgagcacggacgcgagtagctcgtacacctcctcggtctatccgctg
ccctcgccccgacgggcctcgccagtaccggtgactaccacccaagacggccttccacgc
gacgacaagacgccgatgacggagagtcctgcggccagttggagctcgacgacgtccagc
gcggccgccccgccgccgcccaactcggccaacatcttcagcaggttcaggtcccttgga
cgcgggcagaaacggcgcgggagctcagaccccgccgcgcctccggtgatctccaacccg
atcccctaccgcgaagatggggaccaggccgagctagatgggcagcgcttgttgatgctc
gagaaggccaaggcccagcaggccctcgtcgtccaagccgtcctcgcccagcccttcgag
ccctgtggcccgctcgatgcgcccgcgttgatgctcccgccagacacgacgatcctggtc
tctgaggaagagccccagtcgggcggctgggaggtcgcgtatcgcggcctcgtcgcgact
accgagctcgatgcagaggtcctcatggacgtcctccccggatggatcctcggcttcctg
ctcgctaaccggatctcgaacaaggaaggcggcgcatcaacgacgacgacgacgacgacg
gtcaaggtgacgttcgtgttgcagcccgagggcgggcgagaggctgccggcctcccagag
cttcccaacgggaacgcacgattgacggcgtcgcgcgtgttgcggatgaagaaagtggcg
gcgtatgtggcccagaagctggacccggcggggagcgaacagggcacactcacgcccacc
tcgacttcgggcccgaacccccgcctgcccgccgtcgacgaatcgctcatcgtgctctcg
tgtaacggccaagacctcccccgtacgctgtctctcggcgtcgttaagcagtgggtgtgg
gcccagcccggggacgtcgttatctgctatcgccgccaaggtctggcgccgtctgcttga

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