Puccinia triticina (wheat leaf rust): PtA15_5A188
Help
Entry
PtA15_5A188 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14791
periodic tryptophan protein 1
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_5A188
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
90S particles
Other 90S particles
PtA15_5A188
Pre-60S particles
Other pre-60S particles
PtA15_5A188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Xre-like-HTH
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
77809816
NCBI-ProteinID:
XP_053020170
LinkDB
All DBs
Position
5A:join(1671211..1671467,1671527..1671731,1671801..1671982,1672031..1672883,1672969..1673202)
Genome browser
AA seq
576 aa
AA seq
DB search
MASLISSTIWVKRGQAAQHPRRYKLDADELERVSRLAGTRLAQVKELLDEQVEAEQPVDV
DEMIAGEEDDEEEENNSKNSDDEWSDQDSAEQEDKMELDEKDPAAQPADEMAQYNLDDYD
KEQSKGISMGPFSNIKGLQFYQNQSDDPYVTLEDLDNDDAHEREELEIYPTDNLLIAART
EDDVSQLDIYVYDQAEENLFVHHDLLLPAMPLCLEKGCLVAVGTMDPEIEIWNLDVVDGL
YPDAILGNPNPTAAEQPPQAEQASADSNTQAKKINKKKKKKKQQQQQQQQQNPSHPSSPT
TYHTSSILSLSHNKLARNLLLSASADTTIKLWDLNQAPSGPSSTFSAIESFTMHTDKVQS
AQWNPKEATVVLSGGWDGMLKVWDTRNAREGVEVKLDADVECLRWDPFSPLSFVATLDNG
LIQAFDSRMLSQFSPAKKAAKPLWTLAAHDSSVSAFDLSPVIPGLLVSGGLDKMVKVWNL
EDKAGSPSLSMVVSRDLGVGKVFSVGFCPDDPATIAVAGSKASLQIWDLATNNGVRSVFK
DRFKQFASALDLENRKPIGKDGVLGVADDAESDDEN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactcatctccagcacgatctgggtcaagcgaggacaggccgcacaacacccc
agacgatacaagctggacgcggatgagctcgagcgggtatcccggctggctggaacacgg
ctggcgcaggtcaaagaactcctcgacgagcaggtcgaggcagagcagccggtcgatgtc
gacgagatgattgccggcgaggaggacgacgaggaggaggaaaacaacagcaagaactcg
gacgacgaatggtccgaccaggactccgcggagcaggaggacaagatggagctcgacgag
aaggacccagccgcacagcccgccgacgagatggcccagtacaacctcgacgactacgac
aaggaacagtccaagggcatctccatgggcccattcagcaacatcaagggcctgcagttc
taccagaaccagagcgacgacccctatgtgaccctcgaggatctcgacaacgacgatgcc
cacgagcgagaggagctcgagatctatccgaccgacaacctgctcatcgccgcaaggacc
gaagacgacgtctcccaactagacatctacgtctacgaccaagccgaagagaacctgttt
gtccaccacgacctgctcctgcccgccatgccgctctgtctcgagaagggctgcctggtc
gccgtgggcacgatggacccggagatcgagatctggaacctcgacgtcgtcgacggcctc
tatcccgacgccatcctcggcaaccccaaccccactgccgccgagcagccccctcaagca
gaacaagcctcagccgattcaaatacccaagccaagaaaatcaacaagaagaaaaagaag
aagaaacaacagcaacagcaacaacaacaacaaaatccttcccacccctcctcccccacc
acctaccacacctcctcgatcctctccctctcccacaacaaactggcccggaacctcttg
ctctcagcctcagcagacacgacgatcaagctatgggacctgaaccaggccccctcgggg
ccctcgtcgaccttcagtgcgatcgagagcttcacgatgcacaccgacaaggtgcagtcg
gcccaatggaacccgaaggaggcgacggtcgtcctgagtggcggctgggacgggatgctc
aaggtctgggacacacgcaacgcgcgcgagggggtggaggtcaagctggacgcggatgtc
gagtgtctccgctgggacccgttcagcccgctgagcttcgtcgccacgctcgataacggc
ctcatccaggccttcgactcccgcatgctctcccagttctcgcccgctaagaaagccgcc
aagccgctctggaccctcgccgcccacgactcctccgtctccgccttcgacctcagcccg
gtcatccccggcctgctcgtctccggcggcctcgacaagatggtcaaggtgtggaacctc
gaagacaaggccggctcgccctcgctcagcatggtcgtcagtcgagacctaggcgtcggt
aaggtcttttcggtcggcttttgtcccgacgaccccgcaacaatcgccgttgcaggctcg
aaagcgtccctccagatctgggacttggccaccaacaacggcgtccggagcgtcttcaaa
gaccgcttcaaacagttcgcctctgcgctcgacctcgagaaccgcaagccgatcgggaag
gacggcgtgttgggcgtcgctgacgacgccgagtccgacgatgaaaattaa
DBGET
integrated database retrieval system
