Puccinia triticina (wheat leaf rust): PtA15_5A213
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Entry
PtA15_5A213 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_5A213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_5A213
Spliceosome [BR:
ptrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PtA15_5A213
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
DUF2914
Motif
Other DBs
NCBI-GeneID:
77809845
NCBI-ProteinID:
XP_053020195
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All DBs
Position
5A:join(1809257..1809427,1809511..1810743,1810814..1810954)
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AA seq
514 aa
AA seq
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MLDFDFERLCSVTLSNINIYACLVCGKYFQGRSRSSPAYAHSIGEDHHVFINLLSEKVYV
LPDGYEVSDPSLDDIKYLLNPTFTPGLLRKLDAGSQGPSYDLHAVAYLPGFVGLNNIKAN
DYLNVIVHLLAHVPPVRDYFVCRSSEGSFERARASELVQRFGTLMRKIWNPRAFKAQVSP
HEFGQEVATRSGGKFTLTDQADPVEFLGWLLNTLHRDLGGSKASGRKAVEKKTKDTSIIH
AAFRGIVKVEEQEIVAIPDSGEVGKRPQFDINQDGRRLIESTFMFLTLDLPPPPVFQDSV
QKNIIPQVNLTTLLQKYDGSSKVERSGILRTHSCSRLPEFIILHFKRFGSNSFIEEKNPT
IVNFPTKGVDFSVCLGSNHPPHQEGVPSEYLYDLLGNVTYSSTAGTAKEDSQWKVQVHTR
SGNPLQSSDDDPDVKVAKKGEEKWFQIQDLIVEEVNRQMVFLGESYIQIWERRAGSSQSL
QFDDHLNTLRASTSTTPKKPIPSSTPSIPHHPPS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacttcgacttcgaaaggttgtgctccgtcacgctctcgaacatcaatatttac
gcctgtctcgtctgtgggaagtacttccagggccgtagtcggtccagccctgcttatgct
catagtatcggcgaggaccaccacgtgttcatcaatctgttgtcagaaaaagtatacgtc
ttacccgatgggtacgaagtctcagatccatccctggatgacatcaagtatcttctcaac
cctacctttacgcccggtctattacggaaactggatgcgggcagtcaaggaccgtcttac
gacttacatgctgtggcctatcttccaggatttgttgggctgaataacatcaaggcaaat
gactacttgaatgtcatcgtccacctgcttgcacatgtaccaccggttcgagactacttt
gtctgtcggtcctcagagggctctttcgagcgtgctcgagcctccgagctcgtccagagg
ttcgggaccttaatgcgcaagatctggaacccgcgtgctttcaaagctcaggtgagccca
cacgaattcgggcaggaggtcgcgacccgctcgggcggcaaattcacgttgaccgaccaa
gccgatccagtcgagtttctgggctggttattgaacacgctccatcgggacctagggggc
agcaaggcgagcggccgaaaggcagttgagaagaagacgaaggataccagcatcattcat
gcggcgttcagagggatcgtcaaagtagaagagcaggagatcgtcgcaatccccgactcc
ggtgaagtcgggaaacggcctcaattcgacatcaaccaggatggtcgacgactgatagag
tcgacattcatgttcctcaccctcgacctacccccaccgccggtattccaagactccgtc
cagaagaacatcatcccccaggtgaatctgacgaccctcttacagaagtacgatggctcg
agcaaggtggagcgtagtggaatcctgcgtacccactcctgctcccgtctgcccgagttc
atcattctccacttcaagcgattcggatcgaattcgttcattgaggagaagaacccgacg
atcgtcaacttccccaccaaaggcgtcgacttctctgtctgtctcggctccaaccatccc
ccacaccaggagggcgtgccctcggagtacctctatgacctcctcggtaacgtcacttac
tcctccactgctggtaccgctaaggaagactcccagtggaaggtccaggtgcacactcgc
tctggtaaccccctccaatcatccgacgacgatccggatgtcaaagtggctaagaaaggg
gaggagaaatggttccaaatccaggatctgattgttgaagaggtcaacagacagatggtc
tttctcggcgaaagttatatccaaatttgggaaagaagggcagggtcttctcaatcgttg
cagttcgacgaccatctaaacaccctccgggcttccacctcaaccacccccaagaagccc
atcccttcatccacaccgtcaatccctcatcaccccccaagctaa
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