Puccinia triticina (wheat leaf rust): PtA15_5A49
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Entry
PtA15_5A49 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14301
nuclear pore complex protein Nup107
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PtA15_5A49
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_5A49
03036 Chromosome and associated proteins [BR:
ptrc03036
]
PtA15_5A49
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PtA15_5A49
Chromosome and associated proteins [BR:
ptrc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PtA15_5A49
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
77810151
NCBI-ProteinID:
XP_053020034
UniProt:
A0ABY7CGV0
LinkDB
All DBs
Position
5A:join(522033..522199,522266..523591,523682..523890,523952..524076,524153..524315,524385..524610,524694..524736,524806..524896,524984..525110,525180..525393)
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AA seq
896 aa
AA seq
DB search
MSLIHSGQPLNFSSEDATDEFSLFADALKNLRVDEIDPLDPEHGPAAVWKRICDSKLDNR
NIHLTPEQKESWNLERNTWQLVQMLYTERTAPPQSSCSRITSNPYLPPLKAVNLHLSRSK
DLLELSTFRDWLYTCPRSTHPAEIRRGYWPYTKASLKHTLQKYPHSDSRRPSGKAPPFHS
MDPDAPLRASSQENSRRTQTLQADENMNFVSEPHVIQEKGELEQLDQEYDRAMVKTLFEY
VRAGEMAMALDFCRQCDHPWRAASLAGGQLFHDPALAGFENESCFPQDEVLPDAESLDTA
LNENRNLPPYNRDNRSGCLNRKLWKSMCLHMSSNKSLPTYEQALYGALAGETSSVLPVCY
SWEDHIWCHINAIFENQVDQILESTELGYYWSQGALPPAENHESDETDDDAIISSLQPRD
AARRNFSQRSNGESHTDIKLAMNKAFDKILRSEQTSLAESARNPFHVAQMWLAIDKINDL
FTSFADRLKSASEDFTREHLSHLLRFFSHLILFLRAIDEKVDSQASNAILRGYVQVLEME
NKHNLIAFYVAELQPESGVETYAKYLISLGPSADLPTRRVALLRALEHGLDLSRVACTAV
KLTLQQMTRTSLESNRGHGPNKFSHQLTDKQRELIRSLEWLIIDPVTYLEALIQANSLIR
YFLTAGHPNAAREVVCSVPADVLSVIAQGKDPLAEPEAGDNFGNTHNAILEFTQYREFFD
CLELHVKVAEILSQRPMDGATTSDMQAFTQALEETCDLLYKAVVRILSSEWLQDIRFGMQ
QSIMDEQEQTSDRRIAELNLIRNIYIPELVFRLHGALVDSGTFIVTNLRRALELATLVAS
ESYKNYAEFLPINQDRTAGIHRNQQNRMKDYLRELKVVHLLILKSSGVHPLRPTLK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcattcacagtggccagccgctcaacttctcatccgaagatgctaccgacgag
ttctccctgttcgccgacgcgttgaaaaacctcagggtggatgaaatcgatcctcttgac
cctgaacatggacccgccgccgtgtggaagagaatttgcgactcaaagcttgataatcgt
aatatccatctgacgccggagcagaaagaatcatggaacttggaacgtaatacttggcaa
ctcgttcaaatgctctacaccgaaagaactgcgccacctcagtcatcctgctcaagaatc
acgtctaatccatacctgccacccctcaaagcagtcaatcttcatttgtcaaggtccaaa
gacttgctcgaactatctacattccgagattggctgtacacatgtccacgtagcacccat
ccagctgaaatccgtcgaggatactggccatacaccaaggcctccctcaaacacacactt
caaaaatatcctcactcagattcccgacgaccctctggaaaagcccctccgtttcattcg
atggaccccgatgctccactccgtgccagtagtcaggaaaatagccgaagaactcagacg
ctccaggcagacgaaaacatgaatttcgtatcagaacctcacgtgattcaggagaaaggc
gagctagaacaattggaccaagaatacgaccgcgcgatggtcaaaacactctttgaatat
gtccgagctggcgagatggccatggccctcgatttctgcagacaatgtgatcatccttgg
agagctgctagtttggctggtgggcaattattccatgatccggctctggctggttttgaa
aacgagtcctgtttcccccaagatgaggtcttacccgatgccgagtcactagataccgca
ctcaatgaaaaccgaaacctgcctccttacaaccgtgacaaccgttcaggatgcttgaac
cgaaagctgtggaaatcgatgtgtctgcatatgtcatctaacaagtctcttccgacatat
gagcaggccctctatggtgctctggcaggcgaaacaagctcagtcttacccgtctgttac
agctgggaggaccacatctggtgtcatatcaacgcaattttcgaaaaccaagtcgatcaa
attttggaatcgaccgaactgggttactattggtcccagggagctctgccacccgccgaa
aatcatgaatctgacgagacagatgacgatgctatcatctcgtcccttcaacctcgagat
gctgcgcggcggaacttctcccagcgatccaatggcgaatctcacacggacatcaaactt
gccatgaacaaagccttcgataaaattctccgaagtgaacaaacttccttagccgaaagc
gccaggaacccatttcatgttgcccagatgtggctggcgatcgacaaaataaacgatctg
tttaccagcttcgctgatcgtctgaagtctgcctccgaagacttcacccgagaacatctc
tcacacctcttgcgcttcttctcacatttgattctcttcttacgagcgatcgacgaaaag
gttgatagtcaagcgtcgaacgcgatccttcggggctacgttcaagtcctagaaatggaa
aataagcataacttgatcgcattttatgtcgcggaactccaacccgaatctggtgtcgag
acctacgcgaagtacctgatttctttgggtccctcggcagacctaccgacacgccgcgtc
gctttactaagagccttggagcatggcttagacttatcgcgggttgcttgtaccgccgtg
aagctcactttgcaacaaatgacacgcacatcccttgagtccaataggggacatggtccc
aacaagtttagccatcaactaacggataaacaaagggagctgattcgctccttggagtgg
ctaatcattgatcccgtaacctacctagaagctttgattcaagccaactcgttaatcaga
tactttctcaccgccggccatccaaacgctgctagggaggtcgtctgctctgtgccagca
gatgtgctcagtgtcatcgctcaagggaaagaccctcttgcggagccagaggccggagat
aactttggaaacactcataatgcgatcctcgagtttactcagtatcgcgagttctttgat
tgcttagagttgcatgtaaaagttgccgagattttgagtcaacgaccgatggacggggct
actacatcagatatgcaagccttcacacaggcattggaggaaacgtgtgatctgctgtac
aaagctgttgttcggattttgagttcggagtggctgcaagacatccgatttggaatgcaa
caaagcattatggatgagcaggagcagacgtcggaccgaagaatcgcagaattgaacttg
atcaggaatatctacatccctgaattggttttccgactacatggcgcattggttgattct
ggaacattcattgtcacaaatctgagacgggcgttagagttggccacccttgttgccagc
gagagctacaagaactatgccgagttcttgcccatcaaccaagaccgaaccgctggcatt
cacaggaatcagcaaaaccggatgaaagattatctgcgcgaattgaaggtcgtccatctc
ctcattctgaagtcttctggcgttcaccctttgcgacccactttgaaataa
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