Puccinia triticina (wheat leaf rust): PtA15_5A512
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Entry
PtA15_5A512 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_5A512
Enzymes [BR:
ptrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PtA15_5A512
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
90S particles
Helicases
PtA15_5A512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_23
nSTAND3
AAA_19
ATPase
FtsK_SpoIIIE
NACHT
Motif
Other DBs
NCBI-GeneID:
77810177
NCBI-ProteinID:
XP_053020494
LinkDB
All DBs
Position
5A:join(4147254..4147526,4147627..4147634,4147716..4149793,4149870..4151440)
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AA seq
1309 aa
AA seq
DB search
MGFSRPRYNQKARSHRSAPQEENKNQNSGDYSGVESAVDHEDLRSSSKPPTISTVNQESE
DQGPMSKKKRKRFEAYVQKKLKKERRNELIQGLEKTQSSVKDPSAFISTAHLCSSSVART
QRELKATIAEVETRRRERARGLISSKQKLRSGYHSQTDNEDESEPTPVTNPFSGAVEIRS
ASSESKNMSKETYPQPSKPTDSPTTARHKVVIGSALASGAVTTHVKRPSKKKRKPNRAPS
VSDDDDDSFDDSGSSTSASIASDEPDQSQTSSSGSSSSAWPDEEEWKGCDDTLPVEEALD
TPRNQPQTALTSELAPRVKGSIRDWANKQLQLAEENPDLEATTSTSVPKTVPAHLSTIKS
TKTAPTRCGPLGAPLDLPETPLFLHQKTSHVPLEREEEVIASRSLLPVFAEEHTVMDAIR
RHPVVVICGETGSGKTTQVPQFMYEAGWGKVDGDNPGLIGVTQPRRVAAVSMARRVEKEM
GLTGKGVVSHQIRYDTTTSSTTKIKFMTDGVILRELAADFLLSKYSAVIVDEAHERSINT
DVLIGVLSRIVRLRLKTWMESISSQNSDHHSAEKTSNPDTQTSLCRRPLRLIIMSATLRV
SDFTMNKCLFSEPPPVIEIAARQFPVAVHFMRRTPMDYVTEAFTKTAKIHARLPPGGILI
FLTGQLEITKLCRKLEQKFGKKTVEERKARKAALQSKSFTLPCAQAFPSAGDRDGTVHGD
SPHELVAQVEGFSSGEAELIHLGRDKHEFAADVDEGQEWEEDPEALDTDEEDDQVLERVD
LVEDSDVPMYILPLYSLLPTDQQMKVFEDPPPGTRLVVVATNVAETSLTIPNIRYVIDSG
RAKERHYDLSTGIQSFEIDWISKASASQRSGRAGRTGPGHCYRLYSSAVFENYFPQFAKP
EIQRIPIDGIVLQMKSMNIDTVTNFPFPTPPDRFALRKSEVSLAHLGALSFPQGQSDWFM
KGDPGGEGTITDLGRAMAKYPLSPRFARMLVSGFQYDCLAYVIAMVSILSVGDPFIHESA
IDEDNPTDCLDEQAINETELLKNADCKDREIRRQKRRQFFKVQQQFASLGSGVSDLFKTL
AVVGAYEFGQGNNPSKFCHENFVRPKAMEEIHKLRAQITRIVQAATIETGLKVEFSPSLM
PPSETQLKVLRQLITSAFIDQVAIKASKVKSCQSSSGKPNVNSHTKNLAAYRAIGIEEDV
FIHPSSVLFDSSVHPDPEFIVFQELHRTEKRIWIKGITLINPSWLPVLGKSLCTFSKPIE
NSINKIPSRATDTERKCIVIPKFGGPTLDVELGPVQMTQRKVGNLWVWV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggggttttcacggccacgatacaaccagaaagcaaggtcccacaggtcagcaccacaa
gaagaaaacaagaatcaaaactcgggcgattactccggggtcgaatcagccgttgatcat
gaagacctcagatccagttcgaagccacctaccatctctaccgtcaaccaagaaagtgaa
gatcagggacctatgtcaaagaagaaaaggaaacgattcgaagcttacgtccagaagaag
ttaaaaaaagagcgcagaaatgagctcattcagggattagagaaaacacaatcctcagtt
aaggacccttcggcgtttatctccaccgcccacctttgctcctcgtccgttgcgagaact
cagcgagagcttaaagccacaatcgccgaggttgagacgagacgtagagaacgggctcgg
ggcctgatttcctcaaagcaaaagctccgatccggctatcatagtcagactgataatgaa
gacgaatccgaaccaacccccgtcacgaacccgttttcgggagctgtcgaaattcgcagt
gcttcatccgaatccaagaacatgtcaaaagagacatatccccagccttcaaaacctact
gactcgccaacaacagcacgccacaaggtggtcatcggcagcgcacttgcttctggcgcc
gtaactacacatgtcaagcgcccttcgaaaaagaaacgaaaaccgaatagggccccttcg
gtttctgatgacgacgacgattcctttgacgactcaggatcttcgacttctgcctcaata
gcatcggacgaaccagaccaatctcaaacctcatcttcaggaagcagctcgtcagcatgg
cccgatgaagaagagtggaaaggctgtgacgataccttaccagtcgaagaggcgttggat
actccacgaaaccagccacaaaccgcgctcacatcggaactagcacccagagtcaagggc
agtattcgagattgggccaacaagcagctacaactagccgaagaaaaccctgatcttgaa
gccacaacctcaacttccgtccctaagacggtacccgctcatttatcaaccatcaaatcg
acgaaaactgcgccgactcgttgcggaccattgggagcgcctttggatttaccagaaaca
cctctcttccttcatcaaaaaacgtcccatgtgccacttgaacgagaagaagaagtcatc
gcctcccgttctctgcttccggtatttgcggaagaacataccgtcatggatgctatccga
cgacatccggttgtagtcatttgcggcgagacaggtagtggtaaaacaactcaagtaccc
caatttatgtatgaggctggatggggaaaggtcgatggcgacaatccgggtcttattgga
gtcactcaacctcgcagagtagctgccgtcagtatggctcgtcgagtggagaaggaaatg
ggacttacgggcaagggtgttgtttcccatcaaattcgttacgataccacaaccagctcg
accactaaaatcaaattcatgacagatggtgtcattctacgagagctcgcggccgatttc
ttgctatccaagtacagtgctgtcattgtcgacgaagctcacgagaggagtatcaacacg
gacgtcttgatcggtgtactgagtcgtatcgtgcgattaagactgaagacgtggatggaa
agcatatccagccagaactccgatcaccactcggctgagaagacctccaacccggataca
caaaccagcctctgccgtcgacctttgcgattgatcattatgtcagcaaccctgagggtt
tcggactttaccatgaataaatgccttttttccgagccacctcccgtgatcgaaatcgcg
gcacgtcagttcccagttgccgttcatttcatgcgaagaaccccgatggactacgtcacg
gaagcctttaccaaaacagccaagattcacgctcgcctgccgcctggcggcattttaatc
ttcttaacaggtcagctcgaaatcacgaaactttgtcgaaagttggaacaaaaattcgga
aagaaaacggtcgaggagaggaaggctcgaaaggcggcccttcagtccaaatctttcacg
cttccctgtgcacaggcattcccatcagcaggagatcgtgatggcactgttcatggagat
agtccacatgaattggttgcccaagtggaaggcttttcttctggggaagcagaactgatc
catttgggtagagacaagcacgagtttgctgctgacgtcgacgagggtcaagaatgggag
gaagacccagaggcgctagacactgatgaagaggacgaccaagttttggaaagggttgac
ttagtcgaagacagtgatgtacccatgtacattttacccctttactctcttcttccaacc
gaccagcaaatgaaagtttttgaagacccgccacccggtaccagactggtcgtcgttgcg
accaatgtcgctgaaacatctctgacgattccaaacatccgctacgtgatagatagcgga
cgcgccaaagaacggcattacgacctttctactggaatccaatctttcgaaatagattgg
atatccaaagcttcagcttcccagcgctcgggtcgagctggtcgaactggtcccggtcat
tgttatcggctgtattcttcagctgtgtttgaaaattacttccctcagttcgcgaagcca
gagatccaacgaataccaatcgatggaatcgtcctgcaaatgaagtcgatgaacattgat
acagtcaccaactttcctttccctaccccccctgaccggtttgcgttgagaaaatcagaa
gtatcgctggcccatctcggggctttatcatttccgcaaggtcaaagtgattggttcatg
aaaggcgatcccggaggtgagggaacaattacggatctggggcgagcgatggcgaaatac
cctctgagcccccgatttgctaggatgctagtttccggcttccagtatgactgtctggcg
tatgtgattgcaatggtgtcgatcctatcggttggcgacccattcatccacgaaagcgca
atcgatgaagataatccgaccgattgtcttgacgagcaggccatcaatgaaaccgaacta
ctcaaaaacgccgattgcaaggaccgagagattcgcaggcaaaaaaggcggcagttcttc
aaagtccagcaacagtttgcgagcttgggtagtggtgttagtgatctgtttaaaactcta
gcggtcgtcggagcttacgaattcgggcagggtaataacccttcaaagttctgccacgaa
aactttgtccgacctaaagctatggaagagatacataaattgagagctcagatcactagg
attgttcaagctgcgaccatagaaaccggactgaaagtcgaattctcacctagtttgatg
ccaccatccgaaacccagttgaaagttttaagacaattaatcacatcagccttcatcgat
caagtcgcgatcaaagccagcaaagtgaaatcttgtcagtccagctccggaaagccgaac
gtaaacagtcacactaaaaatttggctgcctatcgggccattggaatcgaagaagatgtc
ttcatccacccgagttcagttctgttcgattctagcgtccatccggaccctgagtttatc
gtctttcaagaacttcaccggaccgaaaagcgaatctggatcaaaggaatcactttaatt
aatccttcttggttacccgtcttgggtaaatctctgtgtaccttttccaagccgatcgaa
aactccatcaacaagattccttctcgtgctacagacactgaacgtaaatgcatcgtaatt
cccaagtttggtggaccgaccctggacgttgagttaggtccagttcaaatgactcaacgc
aaagtcggtaatctctgggtttgggtgtag
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integrated database retrieval system
