Puccinia triticina (wheat leaf rust): PtA15_5A694
Help
Entry
PtA15_5A694 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PtA15_5A694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_5A694
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_5A694
Messenger RNA biogenesis [BR:
ptrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PtA15_5A694
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
Pre-60S particles
RNases
PtA15_5A694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
77810377
NCBI-ProteinID:
XP_053020675
LinkDB
All DBs
Position
5A:join(5803281..5803358,5803427..5803487,5803598..5803676,5803741..5803762,5803835..5803984,5804068..5804135,5804205..5804273,5804344..5804375,5804456..5804517)
Genome browser
AA seq
206 aa
AA seq
DB search
MAETKMKDLATPAMPAETHLVWIDCEMTGLDLTVDQIIEIACIITDKDLQELDDGIQFVI
HVEQPVLDRMGPWCQKQHGKSGLSEACLRSPHTLAEVDQKIRRYLEHHLPGLEGKAVLAG
NSVYADKMFLDKDLPLVSQYLHYRLVDVSSIKELARRWEPKLVELAKPASIPSKHRALDD
IRDSISELRFYQKHFFLPSSSNHGKP
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacgaaaatgaaggaccttgccactccggccatgccggccgaaacgcacttg
gtctggattgattgtgagatgactgggctggacttgacggtagaccagataatcgagata
gcgtgcattatcacagacaaggacttgcaggaactggacgatgggatccaattcgtgata
catgtggaacaacccgtactcgatcgaatgggcccttggtgtcagaaacagcatggaaag
tcgggattatccgaagcttgcctccgatcaccccatacattggcagaagtagatcagaag
attcgacgatatcttgagcaccacttgcccgggcttgaagggaaagcggtcttagcagga
aactcggtgtacgccgataaaatgttcttggacaaagacctacctctggtatcacaatac
ttacattaccgcctcgtggacgtgagctcgatcaaggaacttgccaggagatgggagccc
aaacttgtagagcttgcgaaacccgccagcattccttctaaacatcgcgcactcgatgac
atacgcgactcaatatctgagttacgattctatcaaaagcatttttttcttccatccagc
agcaatcatggaaaaccttga
DBGET
integrated database retrieval system
