Puccinia triticina (wheat leaf rust): PtA15_5A823
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Entry
PtA15_5A823 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PtA15_5A823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrc03009
]
PtA15_5A823
Ribosome biogenesis [BR:
ptrc03009
]
Eukaryotic type
Pre-60S particles
RNases
PtA15_5A823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
77810521
NCBI-ProteinID:
XP_053020804
LinkDB
All DBs
Position
5A:complement(join(7194711..7195225,7195326..7195407,7195503..7196452,7196633..7196906,7197035..7197100,7197202..7197873))
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AA seq
852 aa
AA seq
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MWGSSCGPAAPLDLEFPNFEETSLHPTNYHHLYYKKRSNLASDFRNKGLEKQQQKNLIAE
RFPHLIDSSSMALDSSLNTSTSHRKHHRSTSEADKNRSRNSSPKPESHSSKKVKLKSDQN
IDLPIPKKTHEAPKESDSDSSSDSDTEKQIMQDINPAENDSESGWTTVRNQKKISQTHLP
ENESPLTKSKLKKQEKLRQKTLVNPAEFHFDTRGFRHGRMIQLKDVRDLVLSIMADERNQ
EWMLVKNKSSVKKMVVLMIPGITNELLGIPKPSSPSIMPFPLASNKSQLPILQSLFSHAC
PTKAGGDRLRMFSCFNVFLTCPLSAMAKVKRDEERKKSSRDAVSMDPTTYLLSTEQMVEQ
DYPSLHYQPPISTLDRRQARAKQPLAVHSNPSTPRPPFEAWLTHPEPGFVQTPLYPDSSL
GRPLKILGVDCEMCVTASGSELTRVTIVDSNEQLVYDQLVLPDLPITDYLTRFSGITEER
LKGITTRLIDVQKKLAELIDFNTVLVGHSLDCDLKALKIAHPWVIDTSVIYQHPRGLPMK
PSLKWLASKWLGREIQSNGLPNGGHDSEEDARTAVQLLKKKMEKGLGFGEFTSDTESIFE
RIARGNLPKRSALVDFGTPSSSSNSSGDGQKVHNLVVKNNWKDVDSFTFASDSEVADGII
SALHDHDFVFGRFMELSHSLGWSQPQGAKKEAQENGNEDTVQDEEDSEDGDEKKEERHKK
VCDSLDQTISKLNERLPRGTSFIIINGHSDPRTMAQLNGKKNRFERSLKKQTTLNNHYHH
QNNLSSVSSTLVNLAQPPLNGGNKDSQTDERSGDVAQDKTSAEEDKWTSQDERDLADAVE
KCKIGMSFYRIK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggtcctcctgcggcccagccgcaccactggacctggagttcccaaattttgaa
gaaacgagcctccacccaacgaactaccaccacctttactataagaaacgttcgaaccta
gcaagcgacttccggaataaagggctggaaaaacaacaacagaagaacttgattgccgag
agatttccacatctcatcgattcttcatccatggcacttgattcgtctctcaacacctcc
acctctcatagaaaacaccaccgttcaacctcagaggcagacaagaatcggtctcgaaat
agctcgcccaaaccagaaagccattcgtccaagaaagtcaagcttaaatctgaccaaaac
atcgacctacccatccccaagaaaacccacgaagctcccaaggagtcagattcagattca
tcttcggattcagataccgagaagcagataatgcaggacatcaaccctgcggaaaatgac
tcggaatccggttggacgaccgtcaggaatcagaagaaaatcagccaaactcatctccca
gaaaacgaaagcccattaacgaaatctaagctgaagaagcaagaaaaattaagacaaaaa
accctcgtcaatcccgccgaatttcattttgatactcgtggatttcgccatggaagaatg
atccaactgaaagacgttagagatttggtcctaagtattatggcggatgagcggaatcaa
gaatggatgttagtcaagaacaaaagtagtgtcaaaaaaatggtagttctcatgataccg
gggatcacaaatgaactgctagggattcccaagcctagcagcccgtcaatcatgcctttt
ccacttgccagcaacaaatctcaactaccaatcctccaatccctgtttagtcatgcttgt
ccaaccaaggctggaggcgaccgactcagaatgtttagctgcttcaacgtcttcctgact
tgtcctttatctgccatggccaaagtcaaacgtgatgaggaacggaagaaaagttccagg
gacgcagtgtcgatggacccaacaacataccttctctctacggaacaaatggtcgaacaa
gattatccttctcttcattaccaaccccctatttcgacgctagaccggcgacaagcaaga
gccaaacaaccccttgcggtacattcaaacccatcaacacctcggccaccattcgaagca
tggctcacacacccggagcccggctttgtccaaaccccactataccctgattcgtctctt
ggaagaccgctgaaaatcctgggagttgattgcgaaatgtgtgtgacggcatcaggaagt
gaattgactcgagtgacgattgttgactcgaacgagcaactggtgtacgatcaattggtc
ctaccagacttaccaatcaccgattatctcacgcgcttcagtgggatcaccgaggaaaga
ttgaaagggatcaccactcgcttgatcgatgtgcaaaagaaattggccgaattgatcgat
ttcaataccgttcttgttggccattcgctggattgcgatttgaaagctttgaagattgcg
catccatgggtcatcgataccagtgtgatttaccaacatccacgcggtttaccgatgaaa
ccgtccctgaaatggttggcctctaaatggctaggccgagagatacaatccaatggattg
ccgaatggcggacatgattccgaagaagacgctcgaacggctgtccaacttctaaagaaa
aagatggagaagggcttgggttttggcgaatttacttcggataccgagtcgatcttcgag
agaatagcccgtgggaatcttcctaaacgatctgctttggtcgactttggcaccccgtcc
tcttcctctaattcttccggcgatggtcagaaagttcataatctggtcgtcaaaaacaat
tggaaagacgtcgactcgttcacttttgcttctgatagtgaagttgccgatggaatcatt
tcagctttgcatgaccatgatttcgtgtttggtcgctttatggaactatctcattctctt
ggctggtcgcaaccccaaggtgcaaagaaagaagcccaagaaaacggaaatgaggatact
gttcaggacgaagaggattcagaggatggggacgagaaaaaagaagaaagacacaagaag
gtgtgcgacagcttagatcagacgattagtaagttgaacgagcggctaccgagaggcaca
tcttttatcatcatcaacggacattccgatccccgaacgatggctcaactaaacggcaaa
aagaaccgattcgaacgctctcttaagaaacaaacaacgctaaataaccattatcatcat
cagaacaacctcagcagtgtttcctctactcttgttaatcttgctcagccccctctgaac
ggcggaaacaaggattctcaaacggatgagcgtagtggtgatgtggctcaggacaagact
tcggccgaagaagacaaatggacaagtcaggacgaaagggacttggctgatgcagtcgaa
aaatgtaaaatcggcatgtccttttatagaattaagtag
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