KEGG   Puccinia triticina (wheat leaf rust): PtA15_5A937
Entry
PtA15_5A937       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PtA15_5A937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptrc03009]
    PtA15_5A937
Ribosome biogenesis [BR:ptrc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PtA15_5A937
SSDB
Motif
Pfam: Utp21 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 PQQ_2 Beta-prop_RIG_2nd PEP5_VPS11_N DUF7165 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR19_1st EF_HD VID27 Beta-prop_WDR35_2nd WD40_like Cytochrom_D1 Beta-prop_RIG_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 77810646
NCBI-ProteinID: XP_053020917
LinkDB
Position
5A:complement(join(7990856..7991229,7991322..7991556,7991636..7992097,7992162..7992353,7992423..7993258,7993332..7993727,7993808..7994131,7994229..7994430))
AA seq 1006 aa
MSTSLYAPFRSLGHVTTDVPFVIHSHSTKDSDVLGPTKAQTNSQVILTSVGLGWALWSAD
SLRLLYVGPLTPTPITWLSVHSSGLVLASAGTQIYIYKRTRVVGILKTSDQKTQSDHPSD
DSDSETDLGPESWINGFKRGGSQNSAIQEFISFGNQIVGLSSCGKTLWVWNLDTKELHIT
IELPPTFGLATTLVHPSTYLNRIVVAFQEGQLAIYNIQTGALIHIFQPTLFTTPSKARCS
SAKVPITRMVQAPAVDIIAVGFADGWCSLVDVKFGEEILAVKMGQSDGSNLSTSGVLDSI
TGITFRSESDTQVMITSSSQGHLVIWNLNEGGRLLHIIREAHDSAISNVYFLSGQPVVVT
ASGDNSIKMWLFETPTGLPRLLTHRSGHQRPPHLIRYYGSNGKTILSAGRDKTLRAISIV
RDSRSFELSQGSLTKQASQLAVPVSSLRLPPITNMSHSISRSKDWDDLLTCHEGSAQGRT
WSVQNKRIGKHSFSLIEKKSFQLDPQEEIAKCVCVSACGNYGLMATRGSGKVGMWNMQSG
MKRREFVLPGSSGKGKQSDMILNVIGIATDALNQLVIVATRSGHLHFYDFISGSMRQTVT
LPSGATSILLQRDTGMLAINCSDHRIRILDTDTLEVIRQLEGFTKPILDMTMTTDSRWLV
ATSADSVIRTFDLPTGAMIDAFRTNSVATSVTFSPSGDFLASAHEDSVGIFLWVNRAQFS
GFSYKSLPENYEIPLLDTPVMDGVEDKPTEELEALLGPEAWGSDPSADSQNEIISSKPLE
EGLITLSCMPKSKWQTLLNLEVIKARNKPTEPPKAPERAPFFLPTVAGTEPRFNVASSVQ
ESLNSLAPPADQNKKRKLDLGDSIKVEVEFTKRLSQSEADGEYEEFFQYLGNLSPSALDL
EIRSLCDIQHLLSLMKALEIRLKEGKDFEMVQAILRVFLKVHGPRLAGNEEASIFGLPDQ
NDDHQKFLPAINNLLVVQEEVCAQLNRLVDYGIGVSAFVRGLTGVV
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgtcaacctcactctacgctccattccgatcgcttggccacgtgacgaccgatgttcca
tttgtcattcattctcattctactaaggattccgatgtccttggaccaaccaaagcacag
accaactctcaggtgatcttaacgagtgtcggcttagggtgggccctttggagcgcagac
agcctcagactgttgtatgttgggcctctcactcctacgccgatcacgtggttgagtgtc
cattcctcaggattagtgctggcttcagctggaacccaaatatacatatacaagcgcact
cgtgtcgtcggcatactgaaaacttcagaccaaaaaactcaatctgatcacccatccgac
gattccgatagcgaaactgaccttggacctgaatcctggataaacggcttcaagagaggc
ggcagtcaaaacagtgcgatccaagaattcatctcgtttggcaatcaaatcgtcggtcta
tcatcatgcgggaaaactctctgggtttggaaccttgacaccaaagaactccacattacc
atcgaactgccccccacattcggcttggctaccaccctagtccacccctcgacctacttg
aaccgaatcgtcgtagcctttcaagagggccagttagcaatttacaacattcagacgggt
gcattaatacatatcttccaaccaactttgttcaccactccatcaaaagcccgatgctcg
agtgccaaggttccgatcactcgtatggttcaagccccggccgtagatatcattgccgtg
ggatttgcagatggctggtgtagtttggtcgatgtcaaattcggagaagaaattcttgca
gtgaagatggggcagtcggatgggtctaacctctcgaccagcggcgttttggattctatc
accggaattacttttcgatcagaatcggatactcaagtaatgatcaccagctcatcgcaa
ggccacttggtcatatggaatctcaatgagggcggccgattacttcacatcatccgggaa
gcgcacgactccgctatatccaacgtatacttcttatctggtcagcctgtagtcgtcacg
gccagcggtgataacagcatcaagatgtggctgttcgaaaccccgaccgggcttcctcgt
ctgctcacccacagaagtggtcatcaacgccctcctcatttaattcgttattacggatcc
aatggaaaaacaatattgagcgcgggacgagacaaaaccctcagagcgatcagcattgtt
cgagactcgcgaagcttcgagcttagtcaaggctctctgaccaagcaagcctcccaactt
gccgtacccgtgtcgtcattgcggctgcctcctatcaccaacatgtcacactctatctca
aggtccaaagattgggacgatcttttgacgtgccatgaaggctctgcacaaggacggacc
tggtcagttcagaacaaaaggatcggaaagcactcgttctcgctgatcgagaagaaatcg
ttccagttagacccgcaagaagagatcgccaaatgcgtatgtgtatcggcatgtggaaac
tacggcctgatggctactcgaggtagcgggaaagtgggaatgtggaacatgcaaagtggc
atgaagcggagggaatttgttttacccggatcatctggcaagggcaagcaaagcgacatg
atactaaacgtcattggcattgcaacagatgcgctaaaccagctagtcatagtagctact
cgatcaggccacctccacttttacgatttcatttccggctctatgcgacaaactgtcact
ttaccaagtggtgccactagcatactgcttcaaagggataccggcatgctagcaattaac
tgtagcgaccatcggattcggatattagataccgatactttggaagtcattcgtcagttg
gaaggctttacaaaaccaatattggatatgacaatgacgaccgactctcgctggttggtt
gctacttctgcggattccgtcattcgcacgtttgatttgccaacaggcgcgatgatcgat
gcgttcaggacaaacagtgtcgcaacttctgtcaccttctctcccagtggagacttcttg
gcatctgcacacgaagacagcgtcggtatcttcctgtgggtcaacagagcccaattctct
gggtttagctacaagagtctaccggaaaactatgaaatcccattgctcgatacaccagtc
atggatggcgtcgaggacaagccgactgaggagcttgaagctttgctcggaccagaagcc
tggggctctgatccgagcgcagattctcaaaatgaaatcatcagctcaaagccccttgaa
gaaggactaatcacgctatcctgcatgcccaagtcgaaatggcaaacattactgaacttg
gaagtcataaaggctcgtaataaacccacagagccgcccaaagcgcctgagagagctccc
tttttcctccccactgtggcaggtactgaaccaaggttcaatgtcgcaagcagcgttcag
gaaagcctgaatagtctcgcgccaccagccgaccaaaacaagaagcgcaagctggacctt
ggtgatagcatcaaggtagaagtagaattcacaaaacggctgtcacagtctgaagctgat
ggtgaatatgaggagtttttccagtaccttggaaatctctccccctccgctctagacctt
gagattcgttcactttgcgatattcaacacttattgtcactgatgaaagcattggagatc
cgcttgaaagaaggaaaagatttcgaaatggtccaagcgatcttgcgcgtcttcttgaaa
gttcacggcccgaggttggcaggaaacgaggaagcatcgatctttggattacccgatcag
aacgacgaccatcaaaagtttctaccagcaatcaataacctcttagtcgtgcaggaagaa
gtttgtgctcagctaaatcgactcgtggactatgggatcggcgtcagcgcatttgttcga
ggattgacaggcgttgtttga

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