KEGG   Puccinia triticina (wheat leaf rust): PtA15_6A125
Entry
PtA15_6A125       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K12876  RNA-binding protein 8A
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03013  Nucleocytoplasmic transport
ptrc03015  mRNA surveillance pathway
ptrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PtA15_6A125
  09122 Translation
   03013 Nucleocytoplasmic transport
    PtA15_6A125
   03015 mRNA surveillance pathway
    PtA15_6A125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptrc03019]
    PtA15_6A125
   03041 Spliceosome [BR:ptrc03041]
    PtA15_6A125
Messenger RNA biogenesis [BR:ptrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PtA15_6A125
Spliceosome [BR:ptrc03041]
 Complex C
  Other components
   EJC/TREX
    PtA15_6A125
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_Nup35 Nup35_RRM_2
Other DBs
NCBI-GeneID: 77810692
NCBI-ProteinID: XP_053021052
UniProt: A0ABY7CRZ9
LinkDB
Position
6A:complement(join(1052775..1052877,1052999..1053111,1053241..1053377,1053481..1053654,1053744..1053801))
AA seq 194 aa
MDSTADKNKDGQEDMMAIDETPIQQDVAVKRKGRGFKAGESNEPMELDPSNGQQVVYDRL
DEQQMKEKEQTAGNAARSVEGWVVIVQGVHEEATEEDLMEKFSDYGHVMNLAMPLDRRTG
YVKGYALVEYETRKEAEMAIKSGTESKLLDQTLKCDFAFVRAPTGASAPVGQPKVRRGGR
SRSPPKKPLVNRID
NT seq 585 nt   +upstreamnt  +downstreamnt
atggattcgactgctgacaagaacaaagatggtcaggaagacatgatggcgatcgatgaa
actccgatccagcaggacgtggctgtcaaaagaaaagggagaggattcaaagctggcgag
tccaatgaacctatggaacttgatccgtctaatggccaacaagttgtctatgatcgattg
gacgaacagcagatgaaggagaaggaacaaaccgctggaaacgcagctcgatcggtggaa
ggatgggtggtgatcgtacaaggtgttcacgaggaagctactgaagaagatttgatggaa
aaattcagcgattacggacatgttatgaacctagcgatgccactagatcgtcgaacgggt
tacgtcaaggggtacgctttagtcgagtacgagacacgaaaagaggccgagatggccata
aaatcaggcacagagagcaaactattggaccaaacattgaagtgtgattttgcgtttgtg
agggctcccaccggcgcttctgctcccgtcggtcaacctaaagttcgtcgaggaggtaga
agtaggagtccacctaaaaaacctctcgttaatcgaattgattaa

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