Puccinia triticina (wheat leaf rust): PtA15_6A28
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Entry
PtA15_6A28 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc04120
Ubiquitin mediated proteolysis
ptrc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PtA15_6A28
04120 Ubiquitin mediated proteolysis
PtA15_6A28
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptrc04121
]
PtA15_6A28
Enzymes [BR:
ptrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PtA15_6A28
Ubiquitin system [BR:
ptrc04121
]
Ubiquitin ligases (E3)
U-box type E3
PtA15_6A28
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
77810863
NCBI-ProteinID:
XP_053020955
LinkDB
All DBs
Position
6A:complement(join(292801..292868,292970..293119,293219..293935,294093..294134,294201..294535,294618..294775,294864..295187,295296..295511,295577..295678,295756..296447,296525..296603,296685..296882,296960..297133,297205..297207))
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AA seq
1085 aa
AA seq
DB search
MLQLQQLPRRSSAMGGGKNGGNNDTITKSDAEKIRLKRIAKLQSSLTDSDSSPKPQEEAA
PACSSSSVFAKPPAPKQPEKLLPRVATPQTGSYSNTTSKPCTLSPEELRQWEHGMMTRIF
KATLDKEVSAKYQSDLVYLEEFRNEIEEEEPGSSKLLSVEIADRLLIARLSLNPSDLPSP
EPNMGAIQAQLRNQSAFEYLTKSWSRALEERSKALASKSSPTNKVRLIEKIKELLVSYIG
LVTVEPSMFPTSENAKSGTDELVNLFINPAPSDPLIHHKWTLIHELANRFDNDGLEDVIG
PTLVRIAMDTNLLTSKWHIGGHEWRVPVRTVEDLMEVKPIARMVPNLPAWMPLANSHDNG
RRIEFFWLFGPIMSLSTFPDRVPTIASEYFSNSKERPHADLESASKGLQATLNSLQLSLF
NIFDRIVRSGPVPREAVLEFWAQAIQLNNKRAAIQVDKNAVASDGTMINTQAVLLQFAAP
FLDSQYSKIDKVDPLYFKRSTRLNIREETKINATLQESEEFLGSSTNPEPVNFISEIFFL
NVAIFRLGILTIAKNWNTKARDIDDMKKELVRAEADRRWDGTPQESARKASLEKFKKEIL
KLESQLVAYEVQMCDPEFLSKCNSFCSFVMTWCVKMVDPLHQHPRVPIKLPLPNECPLEF
RMLPEYVLEDVIEFYSFISRHSPGTLLQSAVVIDELLTFTLVFLTTPYLKNYHLKSKFIE
ILYYNTLPIQNRKNGILGDSLDYHPLALAHLMPALMQIYVEVEITGSHTQFYDKYVALIL
RKVWDNQTHRAALKKESLTDSFIRFANLLMNDVTYLLDDTLGQLQEVHRIETMMADREAW
QSLPESERKEEEGKLLACERHCPSFLSLANENVRMLKIFTEETPNAFLKSEIVVRLAAML
DYNLNTLAGPKCQTLKVKDPKKYNFQPKDLLSDLLQVYLNLWDRAPFHEAIANDGRSYTK
ELFERADRIARKANLKSTEELEKLAKLVEKVEELKQLEAEEELELGDIPDEFLDPLMATL
MREPVILPTSKTTVDLSTIKQHFLSDATDPFNRMPLKIEDVIPDVSLKEKIEVWVKEKKS
SKMEF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaactccaacaactcccaagaagatcgagcgctatgggaggaggtaaaaacggg
ggcaacaacgatacgattaccaagtcggatgctgagaagattcggctcaaacgaatcgcc
aaactacaatcatccctgactgattcagactcatctcctaaaccacaagaagaggcggct
ccagcatgttcttcctcgtctgttttcgcgaagcctccggccccaaaacagcctgaaaaa
ctactcccacgagttgccaccccacaaactggatcctattccaataccacttcaaagcct
tgtacattaagtccggaagagctccgtcaatgggaacatggcatgatgactaggatcttc
aaggcaaccttagataaagaagtctctgccaagtatcagtcggatttggtttatttggaa
gagtttcgaaatgaaatagaggaagaagagcctggttcatcaaagctactttcagtagag
attgctgaccgattattgattgctcgattatcgttgaacccctcggatcttccgtctccc
gagccaaatatgggggccattcaagcccaattacggaaccaaagcgctttcgaatatctt
accaagagttggagtcgtgcactggaagagcgctctaaggccttggctagcaagtcatct
cccacgaataaggtacggctgatcgagaagataaaagaactcctcgtcagttatattggg
ctggtcactgtagagccgagtatgttcccaacttcggaaaatgcgaaatccgggacagat
gaacttgtcaatctgttcatcaatcctgccccatccgatcctttgatccaccataagtgg
acactcattcacgagctcgcaaatcggtttgataatgatggattggaagatgtcatcgga
cccactctggttcgaatagcaatggacaccaaccttttaacctcgaaatggcacatcggt
ggccatgaatggcgagtacccgttcgaactgttgaagatttgatggaagtcaagccaatc
gcacgcatggtacccaatcttccggcttggatgccgctcgccaactcacacgataatgga
aggagaatcgaatttttctggctatttggaccgatcatgtcactatccactttcccagac
cgagtgccaactatagcatccgaatatttcagcaactccaaggagaggcctcatgccgat
ctcgaatcagcttcaaaaggcttgcaagccactctgaattcgttacagttgagtctgttt
aatatttttgatcggattgtgcggtctggaccagttcctcgtgaggctgtcctcgagttt
tgggcgcaggctatacagctgaacaacaagcgagcggcgattcaagttgataagaacgcg
gtagcctcagatggaacgatgatcaacacgcaagccgtcctgttacaatttgctgcccct
ttcttagactcacaatacagcaagattgacaaagttgacccattgtacttcaaacgatca
actcgattgaacatccgagaagagacgaaaatcaacgcgacgctacaagaatctgaggaa
tttctcggatcatccaccaatccggaaccggtgaatttcatcagtgaaattttcttcctc
aatgtcgctattttccgcctcggtatcttgacgattgccaagaattggaacacgaaagct
agggacattgatgatatgaagaaagaattggttcgtgcggaagccgatcgacgctgggat
gggacgcctcaggaatctgcccgcaaagccagtttggaaaaattcaagaaagagatttta
aagctggagtcacagctagtagcctacgaagtccaaatgtgtgaccccgaatttttgagt
aaatgtaacagcttttgtagttttgtaatgacttggtgtgtcaagatggtcgatcctctt
caccaacacccacgagttccaatcaaattacccctaccaaatgagtgtccattggagttt
agaatgttacccgaatatgtcttggaagatgtcattgagttttactcttttatctcccga
cactcacccggaacgcttcttcaatcagctgtggtgatcgacgaactgttgaccttcacc
ctcgtcttcctcaccacgccttatctcaaaaattaccacctcaaatccaagttcatcgag
atcctatattataatactttgcccattcagaatagaaagaacggtattctgggcgactcg
ttggactaccatcctctcgccttggctcatctcatgcctgctttgatgcagatttacgtg
gaggtggaaatcaccggcagccacactcaattctatgataaatatgttgcattaatcctt
cggaaagtgtgggacaatcaaacacatcgggcagctctgaaaaaggagtcattgacggat
tcgttcatccgatttgcgaacttattgatgaacgatgtgacataccttttggacgatacc
ctgggacagctccaagaggtccatcggatcgaaactatgatggccgatcgagaggcctgg
caaagcctcccagaatcggagcggaaagaggaagaaggcaagttgttggcgtgcgagcgc
cattgccccagcttcttgagtctcgccaatgaaaatgttaggatgctcaagatcttcaca
gaagagacaccgaatgcgttcttgaaatcggaaatcgtcgttcgattggccgccatgctg
gactacaatctcaacacattagccggccccaaatgccaaacgctgaaagtgaaagatcct
aaaaaatataacttccaacctaaggacttattatctgatttattacaagtctatttgaac
ttgtgggatcgagcgccatttcatgaagccatcgcaaacgatggaagaagttacaccaaa
gaattgttcgaaagggctgatcgaatcgccaggaaggcaaacttaaaatcgaccgaggag
cttgagaagttggccaagctagtcgaaaaggtagaagagttgaagcagttagaagcagag
gaagagttggagttgggcgacatccctgatgaatttttagatccgttgatggctacctta
atgagggagccggtgatcttacccacttccaagacgacggtcgatttgtcaaccatcaag
caacatttcctcagcgatgctactgatcctttcaatcgaatgccgttgaagatcgaagat
gttattcctgatgtgtcgctaaaagaaaaaatcgaggtttgggtcaaggaaaagaaaagt
tctaaaatggaattctaa
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