KEGG   Puccinia triticina (wheat leaf rust): PtA15_6A355
Entry
PtA15_6A355       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03440  Homologous recombination
ptrc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PtA15_6A355
   03460 Fanconi anemia pathway
    PtA15_6A355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptrc03032]
    PtA15_6A355
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_6A355
Enzymes [BR:ptrc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PtA15_6A355
DNA replication proteins [BR:ptrc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    PtA15_6A355
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     PtA15_6A355
    Bloom's syndrome complex (BTR)
     PtA15_6A355
   FA (Fanconi anemia) pathway
     PtA15_6A355
SSDB
Motif
Pfam: DEAD Helicase_C RQC RecQ_Zn_bind HRDC
Other DBs
NCBI-GeneID: 77810946
NCBI-ProteinID: XP_053021281
LinkDB
Position
6A:complement(join(2642039..2642204,2642299..2642418,2642587..2642626,2642714..2642798,2642917..2643294,2643376..2643534,2643628..2643960,2644159..2644309,2644390..2644469,2644579..2644919,2645077..2645191,2645316..2645548,2645642..2646579,2646686..2646822,2646920..2647429))
AA seq 1261 aa
MTPFAFKDDSRPSQSTSTQKNSSTQARNLQAHTRPCPILSQSTQNSTPITNTKRPPPSDS
HPAQSIKKSRATPPTQDLRLKDNLDEFPVDGDIDFLEQIHQSDRSQPSNLDKQQVRPTHP
ANITAQPKPLPLGPSHIAQPNSAVSTPSNLHGRPTLGPLGRVFVEPTMQEIDLETLYIKR
HTCISRLVVTLENMISVFQTGECSTGEDFGCLLNTKSYLDGRLAEFNAEVKRRESIGTIL
ESTKPSVGPIPTTSRIDPPISRVAPALVTSPSTSSRLSNENLAPPTKPSSTDHQTPRSTY
RSASATTIPNPPSPKTTRPNQAIHQPAHLERPATSNSTRTYQSQCNIQPKSNIQPNSNFQ
PNSNFQSNRNFANDLRISSPNPADEPEPECIDEPLQEASHDSIDPYLLEGIFSADEDDLQ
ELENGYPDQTNDSQNAAPSGSIDIIQPTRSKHSATKSNVPPIETSVAKTTQTVEDYSKKM
NHRWSRDVGKALAKIFKLHTWRHNQVDAINTTLSGKDCFVLMPTGGGKSLCYQLPAVVRS
GATKGVTFVISPLISLITDQVQALCAKDIGAAAFTGTMTAQERDYVINDLQSDEPALCLV
YVTPEMIMRSSVLSRILTDLKNRKLLARFVFDEAHCVSQWGHDFRPDYKDIGPMLRKEFK
TIPFIALTATANHRVQQDVMSNLQITGCRVLTQSFNRANLRYEVRPKTKDVLSDIIRIIT
VDHQGESGIIYCLSKKQCEEVAAHLSTKNRIKAHHYHAGMSKEDRQKIQHGWQVGKLQVI
CATIAFGMGIDKPDVRFVVHHSMPSSLEGYYQETGRAGRDGQISECILFYSYRDFTVFMR
MVEQSTTSKDQIERQQANAKQVVGFCLNKVDCRRSQILSYFGEKFSASECMKTCDTCMNP
ETVVMKDVSQLMKGVVKVVKQITARRAESVTIAHIVDVFRGSKSKKITNAGHDQLDGAGQ
GSTLDRTDCERLLHLMVSRDILNERYESNAMGFTNAYVQLGTAHQELLNNKGPVMMAFSR
ETGTTKRTAPTGPPKKTVVRAKKGGGKEVSVVEDSDEDFVVNDSHESDAPARPARASRTQ
NGGPPVRGGVKKALATIKAKHQLNEPQSTGAGSVQDCYNALLLLRDILTDGDVVDEDFPS
EEALQTIACIHPHSLQELGAIDGLSKQCIDQHGASIMKVLNKFKSQDLNQPPQKNSHNTR
QESKSTTSTTNRPVDFHQHVSKYVASTTQGSKTTASNNFKKFVPRTAGGSSAGIKPMPVP
R
NT seq 3786 nt   +upstreamnt  +downstreamnt
atgactcctttcgccttcaaggatgattcccgcccatctcaatccacatcaacgcagaag
aatagctcaacccaagcaagaaaccttcaagctcatacccgtccatgcccgatactatca
caatcgactcaaaactcaacaccgattactaacactaagcggccccctcctagcgacagc
cacccagcccaatcgatcaaaaaatcacgggcaaccccacccactcaagaccttcggctc
aaagacaacctcgacgaattccccgttgacggtgatatagacttcctcgagcagattcat
caatcagaccgcagccagccctccaatcttgacaaacaacaagtcagacctacccacccc
gcaaacattaccgcccaacccaagcctttaccactgggaccttcccatatcgcccaaccc
aattcagccgtctcaacaccttccaatcttcatggtcgacccacccttggcccacttggt
cgggtatttgtcgaacccaccatgcaagaaattgatcttgaaactctttacattaagcga
catacatgcatctctaggctcgtggtgactctagagaacatgatcagtgtctttcagact
ggagaatgctcgacgggtgaagacttcggctgtttactcaatacaaagtcatatttggac
ggcagacttgctgaattcaatgcggaagtcaagcggcgcgaatccatcggaaccatactc
gaatccaccaaaccatccgttggaccgatccctacgacaagtaggattgaccctcctatc
agtcgcgttgctcctgccctggtcacttctccttcaacatcatcgcgtctctcgaacgaa
aacctcgctcctccaaccaagccatcctcaaccgatcatcaaacccccagatctacatat
cgttcagcttctgcaacaacaattcccaaccccccttcaccaaaaacgacccgcccaaat
caagcaatccatcaacctgctcaccttgaaagacctgctacctctaattcaacaagaacc
tatcaatcacagtgcaacattcaaccaaaaagtaacatccaaccaaatagcaactttcaa
ccaaacagcaactttcaatcaaataggaactttgccaacgatcttagaatttcaagtcca
aatccagccgatgagccagaacctgaatgtattgatgaacccttgcaagaagccagccac
gactcaatagatccatatcttctggagggtatcttttccgctgatgaggatgaccttcaa
gagctagagaatggctatccagatcaaaccaacgactcccaaaatgcggcaccgagcggg
tctatagacatcatccaacccactcgaagtaaacattcagcgaccaaatcaaatgtacca
ccaatcgaaacatcagttgcaaagaccacacaaactgtcgaagactattctaagaaaatg
aaccatcgttggtctagagacgtcggcaaagctctcgccaaaatattcaaactgcacact
tggagacacaaccaagtcgatgccatcaatactacactctctggaaaagactgctttgtt
ttaatgcccacaggagggggaaaatctttgtgctatcaattaccagccgtggtaaggtcg
ggtgcgaccaaaggcgtaacatttgtcatcagtcctttgatcagtctgatcaccgatcaa
gttcaggcattgtgtgctaaagatattggagccgctgcgttcacgggtacgatgacagcc
caagagagggactacgtgatcaacgatctccaatcagacgaacctgccttgtgtctggtt
tacgtcactcctgagatgatcatgcgaagttctgtattatccagaatcctaaccgacctc
aaaaaccggaagttgctggcccgctttgttttcgatgaggcgcattgtgtaagtcaatgg
gggcatgatttccgtcccgattataaggacatcggtcctatgcttcgaaaagaattcaag
actatcccatttatcgctttgacggcaacagcaaaccaccgggtccagcaagatgtgatg
tcaaacctgcagataactggctgtcgggtcttgacccaatccttcaaccgagcaaatctg
agatatgaggtccgacctaagaccaaggacgtgctgagcgatatcatccggatcatcacc
gttgatcatcagggtgaaagtgggataatctattgtctttcgaagaagcaatgcgaagaa
gttgccgcacacctctccacaaagaaccggattaaagctcaccattaccatgctggaatg
tccaaggaggatcggcagaaaattcaacatggctggcaagttggcaagttgcaagtaatt
tgtgcaacaatagctttcgggatgggaattgataagccggacgttcggtttgtcgttcat
cattcgatgccctcttctctcgaaggatattatcaagaaacaggtcgagcagggagagat
ggtcagatttctgaatgtatcttgttctactcttatcgagattttactgtatttatgaga
atggtggagcaatcgacgacctcgaaagaccaaatcgagcggcaacaggcgaatgcgaaa
caagtggtcgggttctgtcttaataaggtagactgcagaaggtcacagatcctcagttat
ttcggcgagaaattctcggcttcggagtgtatgaagacctgcgatacgtgcatgaaccca
gaaacagttgtgatgaaagatgtctcgcagttgatgaagggggtcgtcaaagtagtcaaa
caaatcaccgcccgtcgagccgagtcggttaccatcgctcatatcgtcgatgtctttaga
ggtagtaagagtaaaaaaatcacgaatgctggacacgatcaactagacggtgctggacaa
ggcagtactctcgatcgaacggattgcgagaggttacttcatctgatggtttcgcgagac
atcttgaacgaaagatatgagtccaatgccatgggtttcaccaatgcctatgtccagctt
gggacggctcatcaggagctactaaacaataaagggccggtgatgatggcattcagcaga
gagactggtacgacaaaacggaccgcgccgaccgggccgccgaagaagacagtggtcagg
gccaagaaaggcggggggaaggaggtcagcgtagtggaagattcagatgaagacttcgtc
gtcaatgactctcacgaatccgacgcgcccgcaagaccagctagagcctcacgcactcaa
aacggcggaccccccgtcagaggtggcgtcaagaaagccctcgctactattaaagctaaa
catcagttaaacgagcctcaatctactggggcgggttcggtccaagactgttataatgcc
cttcttctactcagggatatcttaacggatggtgacgttgtggatgaagactttcctagc
gaggaagccctgcagacaatagcttgcattcaccctcattctctacaagaattaggtgct
attgatggactctcaaagcagtgtattgaccaacatggcgcatctattatgaaagtcttg
aataaatttaaatctcaagatttgaatcaaccaccgcaaaaaaacagccacaatacccgg
caagaaagcaaatcgaccacttcgacgactaaccggcccgttgattttcaccaacacgtt
tcgaaatacgtggcgtcaactactcaaggctcgaaaacgactgcgagtaacaacttcaag
aaattcgtccctcgcaccgctggtgggagctcggctggaattaaaccaatgcctgtcccg
cgatga

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