Puccinia triticina (wheat leaf rust): PtA15_6A876
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Entry
PtA15_6A876 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K12822
RNA-binding protein 25
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PtA15_6A876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrc03041
]
PtA15_6A876
Spliceosome [BR:
ptrc03041
]
Complex A
U1 snRNP components
U1 related factors
PtA15_6A876
Complex B
PtA15_6A876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
77811521
NCBI-ProteinID:
XP_053021799
LinkDB
All DBs
Position
6A:complement(join(7635379..7635446,7635552..7635738,7635811..7637247,7637325..7638220,7638282..7638294))
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AA seq
866 aa
AA seq
DB search
MYGSPYPPYGHPPAGKPPYGPPASSFPTPPPFIPPSSSQSPQQPPAFPHNVSPPGNPAPQ
QPGRPAGFAPPPQQALPLPQSSPPSAQTQLPQAPKPGIPPPHMPFQHLPPPPGFPHLHPP
PHLAPPIMPQPHPHQFPHHPPPGSYFPPPTRHAGLGSHAQPLNINAVLSPPLNLPSAPPN
LSQPPPASSPAALPARPVPTEIYSLFVGSIAEGVDDAWLERLLGCAGHLVSLRRIRDPNG
KPKPFGFAEYGDAESVLRCLKVVNGRKLPIDGGRAGEKALLVKPDDKTKARLEAYEANRI
KTDQDADLDTQAIERLEGLISQMKDPDVVAATASDPNAASNSASANAKRNSAAHLQDLAP
EDLPEESRGTITREIQFFRERAISKRGEAEKAAKERERGHRDSGSGSPAGPRGYNATNGK
AGYGSSNNTPMGPRGTPSGSGGGSMAAHDPQSSSNRPMGFVRAGQMAAAKQSALGTANPG
PDGAVPLTDEEEERMREDRRKRMNHLEFKDRERRWETRERNRAQTNQREQQREKAIKEEE
SRLRHQTKTRLANWDDEIEMDRGKELFYSNRLKWRNVRRTFRQREEKSDRIDEELEKEQL
EAIRKESEDFLNRQAEMIAKMQDENRKAGLLQLDEGGKPIQLSFGGFGANPSGAGKPGHP
GGGGGGGGGGGGGGGGGTHMQPISLKKESKLAGGLLGNGDDDDDGFKKKRALIPLTYDDE
DSKAENAAAAKINIRFGKGQLKEGAGQSEEKKKLKMKEIVASVPSDKDGLWGVEMKWEWL
SEPMINDKLKPFANKKIVEYLGIQEDELVVAIIDHIRARKDAQGLVEELEPVLAEEAEEF
TLKFWRMLVFELRAAEAGVSSSSVVG
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagcccctaccccccctacggccaccctcccgccggaaaaccaccctacggg
cccccagcgagcagcttcccaaccccgcccccattcatcccacccagctccagccagtcg
cctcagcagcccccggccttccctcacaacgtgtctccccccggcaatcccgccccgcaa
cagcccggccgccctgccggattcgccccaccccctcagcaagccctgccactgccacag
tcctcacccccaagcgcccagacccagctgccccaagcccccaagcccggaatccccccg
ccccacatgcccttccagcatctcccacccccaccaggcttcccccatctccatccgccc
cctcacctcgccccccccatcatgccccagccacacccccatcagttccctcaccatcct
ccacccggtagctacttcccaccacccacccgacacgccggccttggctctcacgcccaa
ccactcaacatcaacgccgtcctatcccccccgctcaaccttccctccgcccccccaaac
ctcagccagccacccccggcctcctcacccgccgcccttccggctagacccgtgccaacc
gaaatctacagcctctttgtcggatccatcgccgagggtgtcgatgatgcctggctcgaa
cgtctgctcggttgcgcaggccatctcgtctccctccgccggattcgtgaccccaacggc
aaaccgaaaccgttcggctttgcggagtatggcgatgccgaaagcgttttgaggtgcttg
aaagtggtcaatggccgcaagcttcctatcgacggcggccgagccggcgaaaaagcatta
ctggtcaagcctgacgataagactaaggctagattggaagcttatgaggccaacagaatc
aagaccgatcaagatgctgatttagacacccaggcgatcgaacgtctcgaaggccttatc
tcacagatgaaagatcccgatgttgtggccgccactgcatcggatcccaacgctgcttcc
aacagtgctagtgccaatgccaagagaaactcggcagctcacttacaagacttggctcct
gaggacctgcccgaggaatccagagggacgatcacccgagagatccaattcttccgagaa
cgagcgatcagtaagcgaggcgaagcggagaaagctgccaaggagcgcgagcggggccac
cgtgattctgggtctggctcacccgctgggccccggggatataacgccaccaacggcaag
gctggttacggctcctcgaataatacccccatgggtccccgtgggactccgagcggatcc
ggtggcggctcgatggccgctcatgatccacagtcctcctccaatcggcccatgggattc
gtccgtgccggtcagatggcggctgccaaacagagtgccctgggcacagccaatccgggg
ccagatggtgcggtgccgctgacagatgaggaagaagagaggatgcgcgaggatagacgg
aagcgaatgaaccatctggagtttaaagatcgtgagcgacgatgggaaactcgagagcgt
aaccgtgcccaaactaatcaacgcgaacagcagcgggagaaggccatcaaggaggaagaa
tctcggctgcgccaccaaacgaagacccggctggctaattgggatgatgagatcgagatg
gatcggggcaaggagctgttctattcgaaccgactgaagtggcgcaacgtgcgccggacg
ttcagacagcgcgaagaaaaatcggaccggatcgatgaggagcttgagaaggaacagctg
gaggcgatccgcaaggaatccgaggacttcctgaacagacaggcggagatgattgcgaag
atgcaggacgagaaccgcaaggccggcttgttacagctggacgagggggggaagccgatc
cagctctcgttcggcggctttggggccaacccgagtggggcaggcaaaccagggcatcca
ggaggaggaggaggaggtggtggtggtggcggtggcggtggcggtggaggaactcatatg
cagccgatctcgttgaagaaggagagtaagctggccggaggcttgttgggcaacggggac
gacgacgacgacgggttcaagaagaaacgggccctgatcccgctgacgtacgacgacgag
gacagcaaggctgagaacgcggcggcggctaagatcaatatccggttcgggaagggccag
ctcaaggaaggggctgggcagtctgaggagaagaagaagctgaagatgaaggagatcgtc
gcgtcggtgccgagcgataaggacggactatggggcgtggagatgaagtgggagtggctg
agcgaaccgatgatcaatgacaagctcaagccgtttgcgaacaagaagattgtcgagtac
ttgggcatccaagaggacgagctggtggtggcgatcatcgaccatatccgggcgaggaaa
gacgcgcagggattggtcgaggagctcgagccggtgctggccgaggaggccgaggaattc
acgctcaagttttggaggatgctcgtgtttgagctccgggctgctgaggctggggtcagc
tcttcatctgttgttgggtag
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