Puccinia triticina (wheat leaf rust): PtA15_8A363
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Entry
PtA15_8A363 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PtA15_8A363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrc03021
]
PtA15_8A363
Enzymes [BR:
ptrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PtA15_8A363
Transcription machinery [BR:
ptrc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PtA15_8A363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
YhfH
Motif
Other DBs
NCBI-GeneID:
77812680
NCBI-ProteinID:
XP_053023014
LinkDB
All DBs
Position
8A:complement(join(3870811..3871026,3871124..3871477,3871562..3874185,3874301..3874826,3874908..3876251,3876362..3876706))
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AA seq
1802 aa
AA seq
DB search
MDPAHPLLTNIKSVSFSPLWASDIRSISVLQITNPSLLDNNNVTSTAGLYDPRLGPIDWK
DICRTCHQLNTQCPGHFGHIELNVPVFHPLFMTHAYQLLRSTCFYCHHFLCSKLVILRYA
AKLKLLEHGLPLESDAIDDFPTSQPISTGKRVPEEGPDQENEDQEADQTAFDLTFYQNSL
AKFVAECLDRKQTPVKPRCSGEDYKIGMCFDRRRQVISELFKLLPKKKCESCGAYSSRMR
KDGHTKIMEYSLVPKQEKYHKLTGKVRPNVLKFSTGSTLSRRSSSVQPSISSSKRQRTGP
VSENGHNFSDVNSDAGASAWAQNSQPARSSCGDIASESDESDVIEDQQAASSRSETESVE
TSNSEDSDDNDVPQDKGTKASKQTERMMLAQEARAHLSQLFINEPELCGLLYGPRYPALQ
SHRQQASASADMFFLDVVPVPPSRFRPAAMMGGMTLESPQNQLLTQILSQTMKLRDLNDE
LATTNRRLKLEKHLNSTEFEALQASRAKLYRQVLEACVGMQVVVNSLMDSTKNPTSMGPG
KLPPQGIKQLLEKKDGLFRMNMMGKRVNYAARSVISPDINIETNEIGVPPVFAKKLTFPE
FVTEHNHDQMHRLVCNGPHKHPGAVYVQDEDGTMISLDKMDEDGRRALANTLRHSSTDAE
NPPNTTRPDIGLPSTRTRTRGIRVHRHLNDGDILILNRQPTLHKPSMMCHRARILKGEKT
IRMHYANCNSYNADFDGDEMNMHFPQSLIAQSEARMIANNDNQYLVPTSGNPLRGLIQDH
VVSGVWMTNKDTFFDREEYYQIIYGALRPEGNYSGQGRVITVPPAIWKPVPMWTGKQLIS
TIMKNITPLDASGLNLRSTSKVRGKSWGSHVSEEEVIFMDGDLLQGVIDKSQIGASPYGL
VHSVYDLYGSEVAGKLLGILSRLFTKYLQHRAFTCRMDDLQLTKRGDEMRSKLISETSQR
GIRATLSTIGLTEWEAKTPHGMIDLENRLQEVLRDDMKMAALDNAYSGENSSLQTAINNQ
CLPSGLAKPFPWNNMQMMTSSGAKGTPVNASQISCLLGQQALEGRRVPVMVSGKTLPSFR
AFETAPRAGGFVAQRFLTGIRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGV
RVHYDHTVRNSDSSILQFHYGDDSLDVTKQKHLNQFDFSLLNRSSLITRFNPSRIAGQVD
CDTAHDYTEGIVKALNKGQHPLPPPTLSIFSPSRNLGSISEKFARDVKAYQLDNPLQILK
SKKSVRKKWPVYSQSNELVAMDMFSSLMHVRFMMGLVDPGEAVGLLAAQGVGEPSTQMTL
NTFHFAGHGAANVTLGIPRLREIVMTASANIKTPTMKFPIRPEVTDDEFERFIKRTARLH
LSQVVDQVVVTERLKTNGSSAQIFKVYEIRLELYPAEEYCREYSINVPAVFKSIAKVFVP
TLERMITRELKTLQSDLKTQLAEIGKGKASSARKGQGSGADGSEDGEEDVPARRVDEADI
EDGDAYDEKRARQRGEVDYDKDGAESDSDEDSEVMDDDKLRKMTGAGKTDEDQDSDEDTS
SSTTASEDSRSRDELEISQDDADELADEVQQLSSYVNSIEFDKHGGHCKLVMQFASTAPK
LLLVGLIEESCRRAVIQEIKGISRALVSQSDDKNKERRFGMTEGANLIAAWDFGHNIIEL
DELYSNDINAMLKTYGVEAARSSIIKEISGVFNVYGISVDYRHLTVIADYMTSEGRYKPF
NRSGLANNVSPFLKASYETTATILTDATIFGDFDNLLNPSASIVLGQAPMTGTNSFDVLV
KT
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggatccagcccatcctctcctcaccaacatcaaatcagtctcattctcgcccctctgg
gcatccgacatccgctcgatctcagtccttcaaatcaccaatccatccctactcgataac
aacaatgtgacttcaactgcaggtctctacgaccctaggcttggaccaatcgattggaaa
gatatctgccggacatgtcatcaactcaacactcaatgtcccggtcatttcggtcatatc
gaactcaacgtacccgtcttccacccactattcatgacacatgcataccaactcttgaga
tcaacttgcttctattgtcatcatttcctatgctccaaattggttattctgcgatacgct
gcaaagctcaaacttctggagcatggcctaccccttgaatcagacgcaatagacgacttt
ccaacctcgcaacccataagtactggaaaaagggtgccggaagaaggtccggatcaggaa
aatgaagatcaagaagcagatcaaaccgcattcgatctcaccttttaccaaaattcactc
gcaaaattcgtggccgaatgtttagatcggaaacaaacccccgtcaagcctcgatgctct
ggcgaggattacaagattggaatgtgcttcgatcgtaggcggcaggtcatttcagaactg
ttcaaactgttgccaaaaaagaagtgtgaaagttgtggagcctactcgtcgcggatgagg
aaagacggccatacgaaaatcatggaatactctctcgttcctaaacaagaaaagtaccac
aaactcaccgggaaagtaaggccgaatgtcctcaagttttcgactgggtcaacattgagt
cggcgttcctcttccgtacaaccatcaatctcatcaagcaaacgacagcgaacaggtcct
gtatccgagaacggccacaatttcagcgacgttaacagtgacgccggcgcttcggcatgg
gctcaaaatagtcaacccgcaagatcaagttgcggtgatatcgcttctgagagtgacgaa
tctgacgttattgaagaccagcaagcagcaagcagccgttcagaaaccgaaagcgtggaa
acttcaaatagcgaagacagtgatgacaacgacgttccgcaagacaaaggcaccaaggca
tctaaacagaccgaaagaatgatgctggctcaagaggctcgggctcatctgagtcagctt
ttcatcaatgaaccggaactctgtggattgttatacggcccacgttatccagcattgcaa
tctcatcgtcagcaagcgtcagcatctgccgacatgttcttcctcgacgtcgtacctgtg
ccgccttccagattccggccggctgccatgatgggtggcatgactctagaatcgcctcaa
aatcaactgttgacccaaatcctcagccaaaccatgaagctccgcgatctcaatgacgag
ctcgcgactactaatcggagactaaagctcgaaaaacacctaaattccaccgagtttgaa
gcactccaagccagtcgagccaagttgtatcgacaagtgttagaagcctgtgtcggtatg
caagtagtggtcaacagcctgatggacagtaccaagaatccaactagtatgggtccaggc
aaactaccacctcaaggtatcaagcagttgctcgaaaaaaaagacggattgtttcgtatg
aatatgatgggtaaacgtgtaaactacgccgcgagatctgtgatttcacccgatatcaat
atcgaaacaaacgagatcggagtgccgccggtatttgccaagaaactgacatttccggaa
tttgtcaccgagcacaaccatgaccagatgcaccggctagtttgcaacggtccgcacaag
catcccggggcggtttacgttcaagatgaagatgggacgatgatttctcttgacaaaatg
gacgaggatggccgacgggcgctagctaatacattgcgccattcatcgactgatgccgag
aacccacccaacacgacaaggcctgacattggattgccatcaacccgaacacgaacgcgc
ggcattcgcgtccatcgccacttgaacgacggcgatattctcattttgaatcgacagcca
acccttcacaaaccaagtatgatgtgtcatcgagcgcggatcttgaaaggcgagaagacc
attcggatgcactacgcaaactgcaattcatacaatgctgattttgacggagatgagatg
aacatgcatttcccacaaagcctgatcgcccaaagcgaggcacgaatgatcgcaaataac
gataaccagtacttagtaccgacctcggggaatccactgcgtggcttaattcaggatcat
gtagtatccggggtttggatgacaaacaaagacacgttttttgatcgggaggaatactat
caaattatttatggagctctccggccagaagggaactactctggccaaggcagggtcata
accgtacccccggcgatctggaagcctgtgcctatgtggactggtaaacagctaatttca
accatcatgaaaaacattactccactcgacgcctcgggactcaacttgaggtccacatcc
aaggtccgaggaaaatcatggggcagtcacgtttcagaagaagaggtcatctttatggat
ggtgatttgctccaaggagtgattgataaatcccagatcggtgcttccccgtacggtctg
gtacattctgtttacgacttgtacgggtcagaggtcgctggaaagctgctgggtatcctc
agtcgattgttcactaaatatctacaacatcgcgcattcacttgcagaatggatgatcta
cagctcacaaaacggggggacgagatgcgctcgaaactcatctccgaaacttctcagcgg
ggtatccgggctacgctgtcgaccatcggactaacggaatgggaagcgaaaactcctcac
ggtatgatcgatttggaaaaccgacttcaagaggttttgagagatgacatgaaaatggca
gcactcgacaatgcctacagcggagagaattcctctcttcagaccgccatcaacaatcag
tgcctgccttctggcctagcgaaaccgttcccctggaataatatgcaaatgatgacttca
tccggtgcaaaagggactccagtcaatgcatctcaaatctcttgtctacttggccaacaa
gctctcgaaggccgtcgggtacctgtcatggttagtggcaagacactcccatcctttcga
gcgtttgaaactgcaccacgggcaggtggatttgttgcccaacgcttcttgactggtatt
cgtccccaagagtactactttcattgtatggctggacgggagggtttgatcgacacggcc
gtcaaaactagtcgatcaggatatttacagcgatgcctaatcaagcatctcgagggagtc
cgagttcactacgaccataccgtccggaacagtgattcttcaatacttcagttccactat
ggagatgactcactggacgtaacaaaacagaaacatctcaaccaattcgacttctcgcta
ctgaatcgtagttccttgatcacccgcttcaatccgagtcgaattgctggccaagttgat
tgcgataccgctcatgactacactgagggaatagttaaggctttgaacaagggtcaacat
ccactaccaccgcccacgctatctatcttcagtcccagtcgaaacttgggtagtatctcc
gaaaaatttgcccgagacgtgaaagcctaccaacttgacaatccactccaaatcctgaaa
tcgaagaagagtgtccggaaaaaatggcctgtctatagtcaatctaacgagctcgtggct
atggatatgtttagttctttgatgcacgttcgattcatgatgggactcgtcgatccagga
gaagctgttggcttgttggccgcacaaggtgtgggagaaccttcaactcaaatgacgctc
aacactttccattttgccggtcacggtgccgcaaatgtcaccctaggtattccacgtttg
cgtgaaatcgtgatgacagcgtcggcgaacatcaagactcctacaatgaagtttccgata
cggccggaggtcacagatgatgaatttgaacggtttatcaagcgaacggcaagattgcat
ctatctcaggtggttgatcaagtagtggtgacggagcgattgaagacaaatggaagcagt
gcacaaatattcaaagtttacgaaatcagattagaactttatccagctgaagagtattgc
cgcgagtatagcatcaacgtgccagctgttttcaagtcgattgctaaggtttttgtgcct
actctggaacgaatgattacccgtgaattgaagacattgcagtcagatttgaaaactcag
cttgctgagatagggaaaggcaaagcaagttcggcacgcaaaggccaagggagcggtgcg
gatggtagtgaggacggtgaagaagatgttccggctcgaagagtggatgaagctgatatc
gaagatggagatgcttatgatgaaaaacgggcacgtcaacggggcgaagttgactacgat
aaagatggtgccgaatcggattcagatgaggattcggaggtaatggatgatgacaagtta
cgaaagatgacaggtgctggtaaaaccgatgaagatcaagatagcgatgaggatacgtcg
tcgagcacgaccgcttcggaagatagtcgaagtcgtgacgaactagaaatttctcaggac
gacgcggatgaactcgcagatgaggtccagcagttatccagctatgtgaactcgattgag
tttgataaacatggtggtcattgtaagctagtaatgcagtttgcctcgactgcacctaaa
ctgctactggtcgggctgatcgaagagagctgtagacgtgctgtgatccaagaaatcaag
gggatctctcgggccttggtttcacaatcagatgataaaaataaagagaggagatttggg
atgactgaaggggcgaacttgatagccgcatgggatttcggccacaatatcatcgagttg
gatgaattatattcaaatgatatcaatgcaatgctaaaaacttacggcgtcgaggctgct
agatcttcaatcatcaaagaaatctcgggcgtcttcaacgtttatggtatctcggttgat
tatcggcatttaacagttattgccgactacatgacttcggaaggcagatataaaccattc
aacagatcgggactcgcgaacaacgtctctcccttcctaaaggcttcatatgaaaccact
gccactattttgactgacgcaacaatctttggcgacttcgacaacctcctcaatccttcc
gcttccatcgtgttaggccaagctccaatgaccggtactaactctttcgatgtccttgtt
aaaacttag
DBGET
integrated database retrieval system
