Puccinia triticina (wheat leaf rust): PtA15_8A663
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Entry
PtA15_8A663 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K18725
nucleoporin POM152
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Pathway
ptrc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PtA15_8A663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrc03019
]
PtA15_8A663
Messenger RNA biogenesis [BR:
ptrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PtA15_8A663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
77813011
NCBI-ProteinID:
XP_053023312
LinkDB
All DBs
Position
8A:complement(join(6144425..6144462,6144552..6144795,6144890..6145866,6145931..6146219,6146325..6146642,6146723..6148500,6148628..6148979))
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AA seq
1331 aa
AA seq
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MAERPPLITPTFCDLPTQRLYVVSSFILIQAYKLIQFLDVIWSGSINERRRLWVYWSFID
AFLIGFLIPFLRIPRLRYNIIQRSLIISSLVFVNWLFVGNWHLQFGFLWAILPRSIKNLF
NYQTAIMEYKVRLNDVISPSSHILGKHTIHILPHSTAKLNPSSQCFCLSAAVRSAFVSIP
ILFNNSIPHLLQYSVMNFTTGEKSLRNVTHAQLQPLTKQKNPQKSLEDWLEDEEGDLPLN
NDNQAQSNQNSRSRPQQSISSGELKLSPTQHLYNLDINNIGVIRLERVLDKENMDIRIAR
TEALVVECPRASFAIDPAASSEKKFTPWPSATGSKEDHKCIGDTENFGLVVKGLAPLSLT
YQQIVNGQRKLVKLEGITSGEFFTPLTSIDTSTLAEKLSISNRPEYTWAESHSIEIPLNV
SLTTPGQHTYQLDSLKDACGHRFDFEKVREASSMFARQEYIDSKSVKVHSRGQISFIDCG
NTDDEPLRLLQGKSVSLRMAIQQQSDMPDPPWKVGISYQPSKSSTLSGTKPPSAWMKELT
FNDREQTFSAREAGVYEIVSLQGKYCQGDMLVPSICSVIEQPTPTIDLNFTSITDKCSGE
IGLQANFLLTGKPPFKLHYLISQVGRQPQAKVKVVQHSRDELLIQPDSPGQFEYSFIRLD
DQYYQGVEIVGKTIKQTVHPLAHARFVRGGKDENIWSCSGESVEAHIELRGAPPYSVAYQ
ILGEEPKVIGGISTSYATLDIAIPQRYIKKGGSFIVTLISITDGNGCLRNLTVSDLNIEV
HRTKPTLKFYGSENERKIVAREGDMVGFPMRLTGNGPWTIEYIHNDSNRPITKVVHGSND
DLLVDRAGKYTLTSVHDRHCPGTVENPTFYLEWIPKPSLMISPHNSGDLIRGVWIKPAVC
EMSDDSIELSLEGTPPFSVNYSVLRKPLGRGEKAVQQSKTIQILKASGTLPMQTLEPGQY
VYTIHSLNDHIYNTPSSSGLLNSQRSGDIQLQQEVLASPQGLLNILPRTTYCVEESLSAQ
ANKGVKIELTGKAPFQVEIEVKNQATQISENFKLQLESKSSLLDLPYKFSSASPHSIKIK
SLEDSSKCKSIAPSIGTLSDSFKQNDSRSPVTIEVAEIASIKPINNKPYYCVGENLEFLL
KGSPPWLIKYEFNGHQSKINVNSQSQSKFSRLAQEPGLFKLLEISSSSSASSIASGGHNS
HNDICNSRLNFERAIKPLPVVKISSGRYFIEDIREGDQSEITFTFEGTPPFAFTYVRTVS
DDSGSSASSSKKSNENAKIKKSGGSGERILESKTITDIYEYSYSIFTKQEGTWSVTFIQD
AFCSFPPFSKE
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacgtccacccttaatcacccctacattttgcgatctaccgacccagagactc
tatgtagtctcttcattcatcctcatccaagcttacaaattgatccagtttctcgatgtg
atttggtcgggttcaatcaacgagagaagaagattatgggtctactggagcttcattgat
gcctttttgatcggcttcttgataccttttcttcggatacctcgtctaagatacaatatc
atccagagatcgctgatcatcagctcactcgtattcgtaaattggttgtttgtcggtaac
tggcatctccagtttggctttctatgggccattcttccgaggtcgatcaaaaatttattc
aactatcaaacagcgatcatggaatacaaggtccgactgaatgacgtcattagcccatct
tctcacatacttggaaagcacactattcacattctgccccatagcacggcaaaactaaat
ccttcaagccaatgcttttgtttatcagctgcagtccggtccgcctttgtttcgattccg
atcctcttcaacaactcaatcccccatctacttcagtattcagtcatgaactttacaacc
ggtgaaaaatcgttgagaaatgtgacccatgctcaactgcaaccacttacgaagcagaag
aaccctcaaaaaagtcttgaagattggttggaagatgaagaaggtgacttacctctcaat
aatgacaatcaggctcagtcgaaccaaaattctcgctcgagaccgcaacagtcaatatct
tcaggcgagctcaaattgagtccaacccagcacctttacaatctagatataaataacatc
ggtgttatacgactagaaagagttctcgacaaggagaacatggacattcgcatagcgcgc
actgaagcgttggttgtggaatgtcctcgtgccagtttcgcgatagatcccgccgctagt
agcgagaagaagttcacaccatggccgtctgcaaccggatcaaaagaggaccataagtgt
attggtgataccgaaaactttgggctggtggtcaagggccttgctccattatccttaaca
tatcagcagatcgtcaacggacagcggaaactggtcaaattagagggtatcacctctggt
gaattttttaccccattaacttcgatcgatacctctacgctggccgagaagttatcgatc
tccaatcgtcctgaatacacttgggctgaaagtcactcaatcgaaatccccttgaacgtc
agcttgacgacaccgggtcaacatacttatcaactcgacagcttgaaggacgcatgtgga
catcggtttgattttgaaaaagtacgagaagcctcttcgatgtttgcgcggcaagaatat
atcgattccaaaagcgtaaaagtgcactcgagaggccaaattagttttatcgactgtggc
aacacagacgatgagcctttgcgattgctacaaggaaaaagtgtttctctaagaatggcg
atccagcaacaaagcgatatgcccgatccaccgtggaaggtgggaatttcttaccagcct
agcaaatcatccaccctctcgggaacaaaacctccgagcgcttggatgaaagagctgact
ttcaatgaccgagagcaaacgttttcggcaagggaagctggtgtgtacgaaatcgtttct
ttacaaggaaagtattgtcagggcgacatgctagttccttccatatgttcagttatcgaa
caaccgactccaacgattgatctaaatttcacgtcgattaccgataagtgctccggagag
atcggacttcaagcaaattttctcttaacaggaaaaccgccgtttaagctccattatctt
atatctcaagtgggaagacaaccacaagcgaaggtcaaagttgtccaacacagccgggat
gaacttcttatccagccagactcgcctggacagtttgaatacagctttattcgcttagat
gaccagtattaccaaggcgttgaaattgttgggaagacgattaagcaaaccgtccacccg
ctcgctcatgcacgattcgtccgaggaggcaaggatgagaacatatggagctgtagtggc
gaaagcgtcgaggcgcacattgagcttagaggtgccccgccatacagcgttgcttatcag
atcttgggagaggagccgaaagtcattggtggaatttcaacaagttatgctactttagac
attgcgatcccccagagatacatcaaaaaaggcgggagcttcatcgtcacactcattagt
atcacagacgggaacggatgcttgaggaacttgactgtgtcagatttgaacattgaagtc
catcgcacaaagccgacattgaaattttacggttctgagaacgagcgaaagattgtggcg
cgtgagggcgatatggtcggttttcctatgcgccttactgggaatggaccttggacgatt
gaatacatccataatgactcgaatcgaccgatcaccaaagtggttcacggctcaaacgac
gacctccttgtggatcgagctggtaaatatacgctcacaagcgttcatgatcgacattgc
cccggtacagtcgagaacccaaccttttatttggagtggatacccaaacccagtttgatg
atctctcctcacaactctggtgaccttattcgtggtgtttggataaaaccggcagtctgt
gaaatgtcagatgacagcatagaattgtcacttgaaggaacgcctcctttttctgtcaac
tattcggtgcttcgcaagcctctcggaagaggtgaaaaagccgtgcagcagtctaaaacg
attcaaatcctgaaggctagtggcacactcccgatgcagacattggaacccggtcaatac
gtctatacaattcatagtttgaacgatcacatttacaacacaccaagctcgtctggccta
ttgaattcacaaaggagtggagacattcagctgcaacaagaagttcttgcttcgccacaa
ggccttctcaacattttaccccggacgacttactgcgtcgaagaaagcttgtcggcacag
gccaacaagggtgttaagattgagttgacgggtaaagcaccatttcaagtagagattgaa
gtgaaaaaccaagcgactcaaatttcagaaaacttcaagcttcagttagaatccaaatcg
agcctgttggatttgccttacaagttcagctccgcttcgccacattcgatcaagatcaaa
tcattagaggattcaagtaaatgtaaatcaatcgccccttcaatcggaaccttatcggat
agttttaaacagaatgattcacgatcgccagtgacgatcgaagttgcagagattgcgtcc
atcaaaccaatcaataacaaaccctactactgtgtaggagaaaatctagaattcttgctg
aaaggatctccgccttggttgatcaaatatgagttcaatgggcaccaatcgaaaatcaac
gtcaactcccaatcacagtcgaagttttctagactggcgcaagaacccggactgtttaaa
ttattggaaatctcttcctcatcgtccgccagttcgatagcttccggtggtcacaacagt
cataacgatatttgcaattctagattgaatttcgagcgtgctatcaaacctttgcctgtt
gttaaaatctcgtctggtcgatatttcattgaagatatcagggaaggtgatcaatccgag
ataacttttacatttgaaggaactccgccttttgcatttacatacgtgagaaccgtatca
gatgactccgggtcatctgcatcttcatcgaaaaaatccaacgagaatgctaagatcaag
aagagtggcggtagcggtgaacggatcttagaatccaagacgatcactgatatctatgaa
tacagttattccatattcaccaagcaagaaggtacttggtctgttacctttattcaggat
gccttctgctcatttcctcctttttcgaaagagtga
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integrated database retrieval system
