Pseudomonas tremae: I9H09_01775
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Entry
I9H09_01775 CDS
T08237
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre03030
DNA replication
ptre03410
Base excision repair
ptre03420
Nucleotide excision repair
ptre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I9H09_01775 (polA)
03410 Base excision repair
I9H09_01775 (polA)
03420 Nucleotide excision repair
I9H09_01775 (polA)
03440 Homologous recombination
I9H09_01775 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptre03032
]
I9H09_01775 (polA)
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_01775 (polA)
Enzymes [BR:
ptre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I9H09_01775 (polA)
DNA replication proteins [BR:
ptre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I9H09_01775 (polA)
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I9H09_01775 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I9H09_01775 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
UQB37166
LinkDB
All DBs
Position
complement(407499..410264)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPESPLAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYDNLEKVATLPIRGAKTLAAKLEEHREM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQEL
VVEEPTVAAKEAAYEVILEQDRFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLSFAIQ
THKAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKTKVGQHAKFAINLLANCAIGGD
QAHGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPVNFQDIAGKGAKQLTFDQ
IAIEQAGNYAAEEADLTLRLHEVFETRLAAIPTLQPVLSDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQPS
TAEAVLSELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRVHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLARDEGLLHAF
RNDLDVHRATAAEVFGVELEGVTHDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLDYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLEESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcctggtggacggttcgtcctacctctaccgcgccttccac
gcactgcctcccctgaccacgtccaaagggttgccgaccggcgccgtcaagggcgtgctg
aacatgctcaagagcctgcgccgccagtaccccgaaagcccgctggccgtggtcttcgat
gccaagggcgggactttccgggacgcgctgtacaccgactacaaagccaaccgtcccagc
atgccggacgacctgcgtgtgcaggtcgatctgctgcatgcctgcgtcaaaggcatgggc
tatccctttctatgcgtcgaaggcgtcgaagcggatgacgtgatcggcaccctggcgcgc
agcagcgcggcggcggatcgcccggtagtcatttccaccggcgacaaggacatggcgcag
ctggtcgacgggcatatcacgctggtcaataccatgaccggcagcgtgctggacgtggcc
ggcgtgaaggagaagttcggcgtcggcccggaacacatcatcgattacctggcgctgatg
ggcgacaaggtcgataacatccccggcgtgcccggggtcggtgaaaaaaccgcagtcggc
ctgttggtcggcgtcggtggcgggataaaggagctttacgacaacctcgagaaggtcgcg
accctgccaatcagaggcgccaagaccctcgccgccaaactcgaagaacaccgtgagatg
gccttcctgtcctacgagctggcgaccatcaagatcgacgtgccgctggacatcgagctg
gaccagctgcattgcggcgagcccgaccgcgacacgctgatggagctgtacgccgagctg
gaattcaagagctggatcgaagacctgcagcgcgacgccaagcgtgccgggcaggaactt
gtggtcgaagagcccaccgtggcggctaaagaagccgcatacgaagtcatcctcgagcag
gaccgtttcgatgcctggctgaaaaagcttcaggctgctccgctgttcgccttcgtgacg
cagagcaacggcaccgacgcccagcgcgcgcagctggtcggcctgtcttttgccatacag
acccacaaagcggcttatatcccactgacccactcgtacatgggcgttccgcagcagctg
gatcgggacaccgtgctcaaggcgctcaagccgctgctcgaagacccggacaagaccaag
gtcggtcagcacgccaagttcgccatcaacctgctcgccaactgcgcgatcggcggcgat
caggctcatggcatcgatttgcaaggtgtgcggttcgacaccattctggaatcctacgtg
ctggactccaccgcgacccgccatgatcgcgacagcctggtagccaagtacctcacgcac
acaccggtcaactttcaggacatcgctggcaagggcgccaagcagctgaccttcgaccag
attgccatcgagcaggctggcaactatgccgctgaagaggccgacctgacgctgcgcctg
catgaagtattcgaaacgcgcctggcagcgatcccgaccctgcagccggtactgagcgac
atcgagatgccgctggtgcccgtgctggcccgtatcgagcgccagggcgcgctggttgat
gcaaacctgctgggcatccagagcgtcgaactgggcgacaagatgaccgcactggagcgc
gaagccttcgcgattgccggtgaagaattcaacctgggctcgcccaagcagcttggcgtg
attctctatgagaaactcggcatgccgatcctgagcaaaacggcgaccggccagccttct
actgccgaggccgtgctgtccgaactggccgagcaggacttcccgctgcccaaggtactg
atgcagtaccgctcaatgagcaaactgaaaagcacttacacagatcgcctgcccgagcag
atcaacccgcgtacaggccgtgttcatacgtcctatcatcaggcagtggccgtgaccgga
cgcctgtcctccagcgacccgaacctgcagaacatcccgattcgtaccgccgaagggcgt
cgtatccgacaggcattcgtggcgccgaagggttataagctgctggcagcggactattcg
cagatcgaactgcggatcatggcgcacctggccagggacgaaggcctgctgcatgcgttc
cgcaacgacctggacgttcaccgggcgacagcggcggaagtcttcggtgtcgaactggaa
ggcgtcacccatgacatgcgccgcagcgccaaggcgatcaacttcggcctgatctatggc
atgagcgcgttcggcctggccaagcagataggtgtggaccgcaagcagtcacaagcctat
gtagaccgctatttcgcccgctaccctggcgtgctggattacatggagcgcactcgcgcc
caggctgccgagcagggttttgtcgaaaccatctttggtcgtcgcctttacctgccggac
atcaacgccaagaacccgtccctgcgcaaaggcgcagagcgcatggcaatcaacgcgccg
atgcagggcacggcggcagacatcatcaaaaaggcgatggtggcggtgaatggctggctg
gaagagtccggcctggatgcgcgggtcattctgcaggtccacgacgaactggtactggag
gttcgcgaagacctggtcgatcagatcagcgagcagatccgtccgcacatgagcggtgca
gcagaattggccgttccgctgctggtggaagtgggtgtcggcaacaattgggacgaggca
cattga
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