Pseudomonas tremae: I9H09_02340
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Entry
I9H09_02340 CDS
T08237
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ptre
Pseudomonas tremae
Pathway
ptre02020
Two-component system
ptre02024
Quorum sensing
ptre02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I9H09_02340 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I9H09_02340 (crp)
02025 Biofilm formation - Pseudomonas aeruginosa
I9H09_02340 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptre03000
]
I9H09_02340 (crp)
Transcription factors [BR:
ptre03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
I9H09_02340 (crp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
HTH_23
HTH_28
TrmB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UQB37268
LinkDB
All DBs
Position
complement(523055..523699)
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AA seq
214 aa
AA seq
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MVAITFTPQASRLDKLLAHAERRRYAAKSNIINAGDHSESLFLILKGSVTVLIEDDERRE
MIVAYLNNGDFFGELGLFEQPGRESVRSAWVRAKTECEVAEISYDTFRELVRQDPEILYA
LGSQMAERLRNTTRKVGDLAFLDVTGRVARTLLDLCKQPDAMTHPDGMQIKITRQEIGRI
VGCSREMVGRVLKALEEQSLVNVKGKTMVVYGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcaataacctttacacctcaagccagcaggctggacaagctactcgctcatgcg
gaacgtcgtcgctatgcagcgaaaagcaacatcatcaacgcaggcgatcattccgagtcg
ttgtttctgattctcaaaggctcggtcactgtgctgattgaggatgacgagcgcagggaa
atgatagttgcctatctgaacaacggcgatttcttcggcgagttgggtctgttcgagcaa
ccggggcgtgaatccgtgcgcagtgcatgggtacgagccaagactgagtgcgaggtcgcc
gaaatctcctacgacaccttccgcgagctagtcaggcaggatccggaaattctctacgca
ctcggcagccagatggccgaacgcctgcgcaacaccacgcgcaaggtgggtgacctggcg
tttctcgacgtaaccggacgcgtggcgcgcacgttgctggacttgtgcaaacagccagac
gccatgacccatccggacggcatgcagatcaagatcacccgccaggagatcggccgcatc
gtgggctgttcgagggagatggtcggccgcgtgctgaaggctctggaagaacaaagcctg
gtcaacgtcaaaggcaaaaccatggtggtctacggcacacgctga
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