Pseudomonas tremae: I9H09_02640
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Entry
I9H09_02640 CDS
T08237
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ptre
Pseudomonas tremae
Pathway
ptre02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I9H09_02640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ptre02022
]
I9H09_02640
02035 Bacterial motility proteins [BR:
ptre02035
]
I9H09_02640
Two-component system [BR:
ptre02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
I9H09_02640
Bacterial motility proteins [BR:
ptre02035
]
Pilus system
Twitching motility proteins
I9H09_02640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
HTH_50
CATRA-C
HTH_30
Pre_tape_measure
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UQB37322
LinkDB
All DBs
Position
complement(595408..596748)
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AA seq
446 aa
AA seq
DB search
MSQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHEWLAREPFDMCLTDMRLPD
GNGLELVQHIQQGYPQVPVAMITAHGNLDTAIHALKAGAFDFVTKPVDLNRLRELVNSAL
SLPSSPPPVRSVDSRLLGESPPMRSLRTQIGKLARSQAPIYISGESGSGKELVARLIHEQ
GPRNEKPFVPVNCGAIPSELMESEFFGHRKGSFSGAHEDKPGLFQAAHNGTLFLDEVADL
PLAMQVKLLRAIQEKAIRSVGGQQEQVVDVRILCATHKDLAVEVAAGRFRQDLYYRLNVI
ELRVPSLRERREDIDQLAASVLRRLAGNGAQPVARLHAQALETLKSYRFPGNVRELENML
ERAYTLCENAEIHASDLRLAECASSQEQNGPSLADIDNLEDYLESIERKLILQALEETRW
NRTAAADRLSLSFRSLRYRLKKLGLD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacggcaaaagattctgatcgtcgacgatgagccggatattcgtgagctcctg
gagatcaccctggggcgcatgaaactcgatacccgcagcgctcgcaatgttgccgaagcg
cacgaatggctggcgcgtgagccgttcgacatgtgcctgaccgacatgcgcctgcctgac
ggcaatggccttgaactggtgcagcatatccagcaaggctacccgcaggtgcccgtggca
atgatcacggctcacggcaacctcgacacggcgatccatgcgctcaaggccggagctttt
gattttgttaccaaacctgtcgacctcaaccgactgcgtgagctggtcaacagcgccctg
agcctgccttccagcccgccaccggtgcgcagtgtcgacagccgcctgttgggcgagtcg
ccaccgatgcgcagtctgcgcacgcaaatcggcaagctggcacgcagtcaggcaccgatc
tacatcagtggcgaatcgggcagcggcaaggaactggtcgcgcgactgatccatgaacag
ggtccgcgcaacgaaaaacccttcgtcccggtaaactgcggtgccattccttcagaactg
atggaaagcgaatttttcggtcatcgcaaaggcagcttcagcggcgcccacgaagacaaa
cctggcctgtttcaggcggcccataacggtacgttgtttcttgatgaggtcgccgacctg
ccgttggccatgcaggtaaagttgctgcgggcgattcaggaaaaagccatccgcagcgtc
ggcggtcagcaggagcaagtggtggatgtgcgcatcctgtgcgccactcataaagacctg
gctgtagaggtcgccgcaggcaggtttcgtcaggatctgtattaccgattgaatgtgatc
gagctgcgcgtgccctcattgcgcgagcgacgtgaggacatcgaccagttggcagccagt
gttttgcgacgactggctggcaacggcgctcagccagttgcgcgcctgcacgcgcaggcg
ctggaaacgctgaaaagctatcgattccccggtaacgtgcgcgaactggagaacatgctg
gagcgcgcatataccttgtgtgaaaacgctgaaatccatgccagcgacctgcgtctggcc
gaatgcgccagctcccaggaacaaaatggcccgagcctggccgacatcgacaaccttgaa
gactacctggaaagcatcgagcggaaactcattctgcaagccctggaagaaacccgctgg
aaccgcactgcagcagcggacaggctaagcctgtctttcaggtcgctgcgttaccgactg
aagaagctggggctggattga
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