Pseudomonas tremae: I9H09_04495
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Entry
I9H09_04495 CDS
T08237
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00521
Streptomycin biosynthesis
ptre00523
Polyketide sugar unit biosynthesis
ptre00525
Acarbose and validamycin biosynthesis
ptre00541
O-Antigen nucleotide sugar biosynthesis
ptre01100
Metabolic pathways
ptre01110
Biosynthesis of secondary metabolites
ptre01250
Biosynthesis of nucleotide sugars
Module
ptre_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
I9H09_04495 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I9H09_04495 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
I9H09_04495 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I9H09_04495 (rfbB)
00525 Acarbose and validamycin biosynthesis
I9H09_04495 (rfbB)
Enzymes [BR:
ptre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
I9H09_04495 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UQB37649
LinkDB
All DBs
Position
complement(980242..981315)
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AA seq
357 aa
AA seq
DB search
MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC
NREDLDRAFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARGYWSQLDE
ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP
TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT
EGEIGETYNIGGHNEKQNIEVVNTVCALLDQMRPDSAHRPHASLITYVQDRPGHDLRYAI
DASKIQRELGWVPEESFESGIRKTVQWYLDNPEWVAHVKSGSYQQWIDKNYTARADK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcttagtaacaggcggtgcaggcttcatcggttcggcggtcattcggcacatc
attgccaatacaacggactccgtcgtcaacgtcgacaagcttacctatgcgggcaatctt
gaatcactccagtccgcggatcaaagcgagcgctatgcgtttgagcacgtcgatatctgc
aaccgcgaagacctcgatcgggccttcaaagagcatcagcctgatgccgtcatgcacctg
gcagccgaatcccacgtagaccgctccatcaccggcccgtcggagttcatccagaccaac
atcatcggcacctatgtgttgcttgaagctgcacgcggctactggagccagctggatgaa
gcgcgcaaggccaacttccgtttccatcatatttcgaccgacgaagtgtatggcgatctg
gaaggcccggaagacctcttcactgaaaccaccccttaccagccaagctcgccctactcc
gccagcaaggccagttccgaccacctggtacgtgcctggagccgtacctacggcctgccg
accctggtcaccaactgctccaacaattacggcccgtgccacttccccgagaagttgatc
ccgctgatcatcctcaacgcgctggaaggcaaaccacttcctatctacggtaaaggtgat
caggttcgtgactggctttatgtcgaagaccacgctcgcgcgctttacaaggtcgtgact
gaaggcgagatcggcgaaacctataacatcggcggtcataacgagaagcagaacatcgaa
gtggtcaacactgtctgcgccctgctcgaccagatgcgcccggattcggctcatcgtccg
catgccagcctgatcacttatgttcaggaccgtcctggccacgacctgcgctacgcaatc
gacgccagcaagatccagcgcgaactgggctgggtaccggaagagagcttcgagtcgggc
attcgcaagaccgtgcagtggtacctcgacaatcctgagtgggttgcccacgtcaagagc
ggcagctaccagcaatggatcgacaaaaactacacagcacgcgccgataaatga
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