Pseudomonas tremae: I9H09_04605
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Entry
I9H09_04605 CDS
T08237
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_04605 (phrB)
Enzymes [BR:
ptre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I9H09_04605 (phrB)
DNA repair and recombination proteins [BR:
ptre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I9H09_04605 (phrB)
Prokaryotic type
I9H09_04605 (phrB)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
UQB37668
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All DBs
Position
complement(999607..1001055)
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AA seq
482 aa
AA seq
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MQLIWLRSDLRVHDNTALTAALQRGPTLAVYLLSPAQWRSHDDADCKVDFWLRNLVELEK
ALGKLNVPLLIREADTWDKVPEVLSTLCKELKVEGVHLNQEYGVNETRRDQAVQQTLEKD
GIHVTHHLDQLLFKPGSILTKTGNYFQVFTQFKKVCYTRLHEAMPRLVRTPPAQQPLSVK
SDAIPEQVKGFATPSKALRDLWPAGEAEASRRMAAFADEQISYYKTDRDFPAKPGTSQLS
AYLAAGVISPRQCLHAALASNQGEFETGDVGTVTWINELLWREFYKHTLVGFPRVSRHRA
FRPETEALKWRDAPDELLAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQSERFDPEGVFIK
RWLPELADLNKKQLHDPSSIGGLFGAADYPKPIVDLSKSRARALAAFKALPARQPAAGPD
NG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacctgcgcgttcacgacaacactgccctgacggcc
gccctgcagcggggcccgacgctggcggtgtacctgctcagcccggcgcagtggcgcagc
cacgacgacgccgattgcaaagtggatttctggctgcgcaatctggtggaacttgaaaaa
gcgcttggcaaactgaatgtgccgctgctgatccgcgaagccgacacctgggataaggtg
cccgaagtgctgtcgacgttgtgcaaagagctcaaggtcgaaggcgtacacctcaatcag
gaatatggcgtcaacgaaacccgtcgtgatcaagcggtacagcagaccctggaaaaagac
ggcattcacgtcacccaccatctggatcaattgctgttcaagccgggcagcattctgacc
aagaccggtaactattttcaggttttcacccagttcaagaaagtctgctatacccgtctg
cacgaggccatgccgcgcctggtgcgcacgccgccggcgcaacagccactgtcggttaaa
agcgatgcgatcccggagcaggtaaagggttttgccacgccgtcaaaagcgttgcgtgat
ctgtggccagcaggagaagccgaagccagtcgccggatggctgccttcgcagatgagcag
atcagttattacaagaccgaccgcgattttccggccaaacctggcaccagccagttgtcg
gcttatcttgcagcaggagtgatttcgccacgccagtgcctgcatgccgctctggccagc
aatcagggtgagttcgaaactggcgatgtcggcaccgtgacctggatcaacgagctacta
tggcgggagttctataaacacacgttagtgggctttccgcgggtttcacgtcatcgcgcc
ttcaggccagaaaccgaggctctcaaatggcgcgatgcgcccgatgaactgctggcctgg
caagaagcgcgcaccggcctgccgatcatcgacgccgcgatgcgccagttgctggaaacc
ggatggatgcacaatcggctaaggatggtcgttgcaatgtttctcactaaaaacctgctg
atcgactggcgcgaaggcgagcgctttttcatgcgccacctgattgacggcgacctggcg
tcgaacaatggcggctggcaatggagttcctccactggcaccgactcggccccgtatttc
cgtatcttcaatccgctatcgcaatcagaaaggttcgaccccgaaggcgtgttcatcaag
cgctggctgccagagctggccgacctgaacaaaaagcagctgcatgacccttcatctatc
ggcggtttgttcggcgctgccgactacccgaaacccatcgtcgacttgagcaaaagccgc
gctcgcgccctggccgccttcaaggcgcttccagcccgccagcctgctgcaggacccgac
aatggctga
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