Pseudomonas tremae: I9H09_04975
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Entry
I9H09_04975 CDS
T08237
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptre03000
]
I9H09_04975
Transcription factors [BR:
ptre03000
]
Prokaryotic type
Helix-turn-helix
AraC family
I9H09_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
MPI_cupin_dom
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
UQB37738
LinkDB
All DBs
Position
complement(1074501..1075397)
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AA seq
298 aa
AA seq
DB search
MSAIDSIQVFQALSSSPHARLEQSAPLGDGLMAAQWNNRHDSQEYHAPTHHTLSCYVADG
TGTFRRDQPDQKGSPGKLCVLPAGHESAWVVNGEIRLAHLYFSPEHFALGCVTLLDREPR
EMQLREHTFLDDEVQADRFQQLIRLNWTEPAERLLTSSLAHEMVSHALLSQAGMREGLRL
KGGLAPHLRRHLVDFIEMHLADPLSLGQLAGMCALSEYHFARMFRESFGLPPHQYLLARR
IEQARQLLRHTVSPLGEIALACGFASASHFSNRFRQTVGATPGEYRQVLGAVHHGLEK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccatcgactccattcaggtctttcaggccttgagcagctccccccatgcccgt
ctggagcagagcgcgccgctgggcgacgggttgatggctgcgcagtggaacaatcggcat
gactcgcaggaatatcacgcaccgactcaccatacattgtcgtgttacgtcgcagacggc
accggcactttccgccgcgaccagcctgatcagaaaggctcaccgggaaaactctgtgta
ttgcctgcaggccatgagtcggcctgggtggtgaatggagagatccgcctggcgcatttg
tatttcagcccggaacacttcgcccttggctgcgtgacgttgctggatcgcgagccccgt
gagatgcaactgcgcgagcacacgtttctcgacgatgaagtacaggctgatcgcttccag
caactgatccgcctgaactggacagaacccgctgagcgcttgctgaccagcagcctggcg
cacgagatggtcagccatgcgttgctcagtcaggcgggcatgcgggaggggctgcgcctg
aaaggcgggctggctccgcacctgcgccgtcatctggtggacttcatcgaaatgcacctg
gccgacccgctaagccttggtcaactggcgggcatgtgtgcgctctcggaataccacttc
gctcgcatgtttcgtgaaagcttcggcctgccgccgcatcaatacctgctggcacggcgc
atcgaacaggctcgccagttgctgcgacacaccgtcagcccccttggcgaaatagcactg
gcctgtggtttcgcaagcgccagccatttcagcaaccgctttcgtcaaaccgtgggggca
acgcccggcgaataccggcaggtgctgggcgctgtccatcacggcctggaaaaatga
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