Pseudomonas tremae: I9H09_05185
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Entry
I9H09_05185 CDS
T08237
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptre03032
]
I9H09_05185
03036 Chromosome and associated proteins [BR:
ptre03036
]
I9H09_05185
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_05185
DNA replication proteins [BR:
ptre03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I9H09_05185
Chromosome and associated proteins [BR:
ptre03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I9H09_05185
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I9H09_05185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UQB37777
LinkDB
All DBs
Position
1123489..1123770
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALEQLGQIVADQLENGVEITLPGIGKLKVAERPAR
TGRNPSTGAAIEIAAKKVIKFVPAKVLTDSINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaaagaccaattgatcgccgatatcgctgaagccatcgacgcgccaaaa
accaccgcgcgtaatgctcttgagcaattgggccaaattgttgccgaccaattggaaaac
ggcgtggaaatcactttgccaggtatcggcaagctgaaagttgcagagcgtccagctcgc
actggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ttcgtaccagccaaagtgctgactgactcgatcaacaagtaa
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