Pseudomonas tremae: I9H09_06030
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Entry
I9H09_06030 CDS
T08237
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptre03009
]
I9H09_06030 (der)
Ribosome biogenesis [BR:
ptre03009
]
Prokaryotic type
GTPases
I9H09_06030 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
NOG1
Ras
ABC_tran
DUF5906
SRP54
AAA_24
NTPase_1
AAA_18
cobW
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UQB37923
LinkDB
All DBs
Position
1304686..1306155
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANKI
DNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLEIALREFPRDEDDLEEGEVEEVAEG
QEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN
EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLYQSV
QNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQVE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRMMSHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggtcgaccgaacgtcggcaagtccaccatgttcaac
cgcctgaccaggacccgcgacgctattgtcggcgatctgtccggtcttacccgtgatcgc
caatacggagaggcgaagtggcaagggcgctcctatattctgatcgacaccggcggtatc
tccggtgacgagcatggcatggacgaaaaaatggccgagcagtctctgctggccattgaa
gaagccgatgtggtgctgtttctggtggatgcccgcgcgggttataccgccgctgatcag
atgattggtgagcacctgcgcaagcgcaacaagcgttcctacgtggttgccaacaagatc
gacaacatcgatgagaacctggcgcgtgccgagttcagcccgatggggctgggcgacgcc
attccggtggccggcgctcacggtcgcggcatctcgcagatgctcgaaatcgctctgcgg
gaattccccagagacgaggacgaccttgaagaaggtgaggtcgaggaagttgccgaaggt
caggaagccaagcgcattccgggcccgagcgaaaaagacggtatcaagatcgcgatcatc
ggtcgtccgaacgtcggcaagtcgacgctggtcaaccgtatgctcggtgaagaccgggtt
atcgtttatgacgagcctggcaccacgcgtgacagcatctatattcccttcgagcggaac
gaagagaagtacacgctgatcgacacggcaggtgtgcgcaagcgcggcaagatccacgaa
gaagtcgaaaagttctctgtggtcaagaccctgcaggccatcaaggacgccaacgtggtg
atcttcgtgatggacgcccgggaaggggtggtcgatcacgatctcaacctgctgggcttc
gctctcgaggcgggtcgtgcactggtcatcgcgctgaacaagtgggacggcatgacgccg
ggcgaacgtgatttcgtgaagatcgaactggaacgccggttgttcttcgtcgatttcgcg
gacatccacttcatctcggccatgcacggcacgggcgtaggcaacctttatcagtcggtg
cagaactcgttcaagtcggccgtaacgcgctggccgaccagccgtctgacgcagatactc
gaagacgcggtcagcgagcatgcgccaccgatggtcggcagccgccgcatcaagctgcgc
tacgctcacctggggggtgccaacccaccgctgatcgtgattcacggcaaccaggtcgag
aaagtacccaagtcttacgtgcggtatctggaaaacacctatcgccgtgtgctcaagctg
gtcggtacgccgatccggatcgagttcaaaggtggcgagaacccttatgaaggcaacaag
aacacgctgacggaccgccaggtcaacaagaagcgtcgaatgatgtcgcaccacaagaaa
gccgacaagaagcgccgcgacaagcgctga
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