Pseudomonas tremae: I9H09_06065
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Entry
I9H09_06065 CDS
T08237
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I9H09_06065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_06065
Enzymes [BR:
ptre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I9H09_06065
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I9H09_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
YajQ
Motif
Other DBs
NCBI-ProteinID:
UQB37930
LinkDB
All DBs
Position
complement(1312932..1314311)
Genome browser
AA seq
459 aa
AA seq
DB search
MIKDPFERLGLDREVITVSQLNGRARVLLEDVFSSIWVEGEISNLSRPASGHVYFTLKDS
SAQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTIEPAGDGALRLAF
DALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPT
AVQGREAINQIVRALKLADAQGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRLMRERLR
LEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHTRQVRLAHMQSRLAAQHPGRTL
AFLRQCLDALAERLPRAIRDQIKARKLQLQSQMQTLNVVSPLATLGRGYSILLDERGHAI
RHASQTRPGQRLTARLGEGELQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaccctttcgaaagactcggcctcgaccgggaagtcataactgtcagccag
ctcaacggccgtgcgcgggtgttgctggaggacgtgttcagcagcatctgggtcgagggc
gagatttccaatctgtcgcgcccagcctcggggcatgtctacttcacgttgaaggactcc
agcgcacaggtgcgttgtgcgttgttccgacaaagcgccgcacgggtgcgtcaggcactc
aaggacggtttgcaggtcaaggtacggggcaaggtttcactgttcgaaggccgtggcgac
tatcaattgattctcgacactatcgagcctgccggtgatggcgcactgcggctggcgttc
gatgcgctgaaagccaaactcagcgacgaaggcctgttcagcgccgagcgcaaggttgcc
ctgccgctgcacccgcaacgtatcggcatcatcagttcgccgaccggcgcagtgatccgc
gacatcatcagcgtgtttcgccgccgagcgccacgggtcgagctgactctgattcctacc
gcagttcaaggccgcgaggccatcaaccagattgtccgcgcgctgaagctggccgacgcc
cagggtttcgacgccctgatcctcgcccgcggcggcggatcactggaagacctctggtgt
ttcaacgaagaggccgtggctcgtgcgattgatgcttgcgtcacgccgatcgtcagtgcg
gtcgggcatgaaaccgacgtttccatcagtgatttcgtcgccgatgtgcgagccccgacg
ccctccgcggctgctgagttgctggccccggactccagcgacctgcaccgccgtgtcgat
aacctgcatcgacggctggtcagccgcatgcaggatcggctcatgcgtgagcggttgcgg
ctggaaggtatctcgcgtcggctgaggcatccgggtgaacggttgcgccagcaatcacag
cgcctggatgacctggacatgcgcctgcgccgcgctttcgaacagaacatgcacacgcgg
caggtgcgtctggcgcacatgcaaagccgtctcgccgcgcagcatccgggccgcacgctg
gcgtttctgcgccagtgtctagatgcgctggccgagcgcttgccaagggccattcgcgac
cagatcaaggcccgcaagttgcagttgcaaagtcagatgcaaacgctaaatgtcgtcagc
ccgctggctacgctggggcgtggttacagtatcttgctcgatgaacggggccatgcaatc
cgccacgcttcacaaacccggcccggccagcgccttaccgcgcggctgggcgaaggcgaa
ctgcaagtacgtgtcgaagacaatcacctcacgcccgtgaccctttcccttctggactga
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