Pseudomonas tremae: I9H09_06750
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Entry
I9H09_06750 CDS
T08237
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptre03021
]
I9H09_06750 (rpoS)
Transcription machinery [BR:
ptre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I9H09_06750 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
UQB38055
LinkDB
All DBs
Position
1475619..1476626
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AA seq
335 aa
AA seq
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MALGNEAPEFDIDDEVLLMEAGIVLKEASDEKQPPAASGRTKVKQSSSLKQHKYIDYTRA
LDATQLYLNEIGFSPLLSPEEEVYFARLSQKGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPTPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTEKQREVVIRRFGLRGHESSTLEDVGLE
IGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctcttggcaacgaagcgccggagtttgacatcgatgatgaagtgctccttatggaa
gccggcattgtcctgaaggaagcgtcagacgagaagcagccacccgctgcctcggggcgt
accaaggtcaagcaatcatcatcgctcaaacaacataaatacattgattacacacgggcg
ctcgacgcaacccagttgtacctcaatgaaatcggtttctcccctctgctgtccccggaa
gaagaagtctattttgcgcgcctgtcgcaaaagggagatccggccgggcgcaaacgcatg
attgaaagcaatctgcggctggtggtcaagattgccaggcgttacgtcaatcgtggcctg
tcacttctcgacctgatcgaggagggcaatctggggttgatccgggctgtcgagaaattc
gaccctgaacgcggctttcgcttttccacctatgccacttggtggattcgtcagaccatc
gaacgggcaatcatgaatcagacccggaccatccggttgccgattcatgtggtcaaggaa
ctcaatgtctatctgcgtgcagccagagagctgactcagaaactggaccacgaaccgacc
cctgaagaaatcgccaacctgctggaaaagccagtgggtgaggtcaagcgcatgctgggc
ctgaatgagcgtgtatcttccgtggatgtgtcgttggggcctgattccgacaagactctg
ctggacactctgactgacgatcgtcccaccgatccgtgtgagcttctgcaggacgatgat
ctgtcgcagagcatcgatcagtggctgtccgaactcaccgagaagcagcgtgaagtggtt
atccgtcgctttggcctgagggggcatgagagcagcacacttgaagatgtagggcttgag
atcggtctgacacgcgagcgtgtaaggcagatccaggttgaaggactcaagcgcctgcga
gagatccttgaaaagaacggtttgtccagcgaatcgctcttccagtag
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