Pseudomonas tremae: I9H09_06885
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Entry
I9H09_06885 CDS
T08237
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ptre
Pseudomonas tremae
Pathway
ptre01501
beta-Lactam resistance
ptre02020
Two-component system
Module
ptre_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I9H09_06885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I9H09_06885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptre02000
]
I9H09_06885
01504 Antimicrobial resistance genes [BR:
ptre01504
]
I9H09_06885
Transporters [BR:
ptre02000
]
Other transporters
Pores ion channels [TC:
1
]
I9H09_06885
Antimicrobial resistance genes [BR:
ptre01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
I9H09_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
UQB38076
LinkDB
All DBs
Position
complement(1503961..1505283)
Genome browser
AA seq
440 aa
AA seq
DB search
MRVMKWSAIALAVTAASAQLATAAPFVSDQAEAKGFVEGSTLDLKLRNYYYNRDKKAGAA
DDRDWTQGIWANFSTGYTQGTIGVGVEAFAYAGVKLWGPDKYSGSGNLITDSAGNNEDTQ
SKAGGAVKFRVSKTELKVGDMQPTSPVFGVGGSRLLPQTASGISLQSSELKGLDVEAGHF
YSGTSQDDTSHGGGIFANYAGVEAKSADFAGGKYAITDSLGVAFYAAKLEDIWDQYYGNV
NYALPLGGDQSLAFDANIYRTVDEGSAKAGSISNTAFSGSAAYSFLAAHTVTLAFQKING
DTPFDYIGIGDNNRGGDSIFLNNSIQYSDFNGPGEKSWQARYDLNMTPYGVPGLSFMTRY
IKGTDIDGTKTPAGSAYAGLYGADGEHHETNLEAKYVVQTGPAKDLSFRARQAWHRANAD
QGEGDVNEFRLIVDYPISIL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgatgaagtggagcgcaatcgcactggccgtcacggctgccagcgcccaactg
gcaacagcggcacctttcgtcagcgatcaggctgaggccaagggtttcgttgaaggcagc
acgcttgacctgaagctgcgcaattactattacaaccgcgacaagaaagccggcgctgct
gacgatcgtgactggacccaaggtatctgggccaacttcagcaccggttacacccaaggc
accatcggtgtcggcgtagaagcttttgcttacgctggtgtgaaactctggggcccggac
aaatattcgggttcgggtaacctgattaccgactctgccggcaacaacgaagacacacag
agcaaggccggtggcgctgttaaattccgcgtttcgaagactgagctgaaagtgggcgac
atgcagcccaccagccctgtgtttggagtcggcggctcgcgcctgctgcctcagacggca
agtggtatcagcctccagagcagcgagcttaagggcctggatgttgaagcgggtcacttc
tactcaggcaccagccaggatgacaccagtcacggcggcggtatctttgcaaactatgct
ggcgttgaagccaaaagcgcagactttgccggcggcaaatacgccatcaccgatagcctt
ggcgtggcgttctacgcagccaaactcgaagatatctgggatcaatactacggtaacgtg
aactacgcgctgccactgggtggcgatcagtcactggcgttcgacgctaacatctatcgc
accgttgacgaaggcagcgcaaaagctggctctatcagcaacaccgcgttctccggctcc
gcagcctactcgttccttgctgcgcacaccgtgaccctggcgttccagaagatcaacggt
gacacgccgttcgactacatcggtatcggcgacaacaaccgcggtggcgattcgatcttc
ctgaacaactcgattcagtactccgacttcaacggtccgggtgaaaaatcctggcaggct
cgctacgacctgaacatgactccgtacggcgtgcccggcctgagcttcatgacccgctac
atcaaaggtaccgacatcgacggcaccaaaacacctgctggcagcgcttatgctggcctg
tacggtgctgatggcgaacaccacgagaccaaccttgaagccaaatatgtcgtccagacc
ggcccggccaaggacttgtccttccgtgctcgtcaggcatggcaccgcgccaacgccgac
caaggcgaaggcgacgtcaacgagttccgcctgatcgtcgattacccgatctcgatcctg
taa
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