Pseudomonas tremae: I9H09_06940
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Entry
I9H09_06940 CDS
T08237
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I9H09_06940 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_06940 (ruvB)
Enzymes [BR:
ptre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I9H09_06940 (ruvB)
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I9H09_06940 (ruvB)
RecFOR pathway proteins
I9H09_06940 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_3
TIP49
AAA_14
nSTAND3
AAA_17
AAA_16
RNA_helicase
Rad17
ABC_tran
AAA_28
AAA_18
NTPase_1
NB-ARC
TsaE
AAA_24
Sigma54_activ_2
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
UQB38087
LinkDB
All DBs
Position
1513313..1514374
Genome browser
AA seq
353 aa
AA seq
DB search
MIDADRLITAAGGRDRDEQMDRAIRPLSLADYIGQPTVREQMELFIQAARGRSEALDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYNIADLSTIVSRSAGILGLVIEPQGAFEIARRARGTPRIANRLLRRVRDFAEVRGN
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRMGEMPAAGDFVDDPADL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacgccgaccgcctgattaccgccgctggtggccgtgatcgcgatgaacagatg
gatcgtgcgattcgtccgctgagtctcgccgattacatcggccagcctaccgttcgcgag
cagatggagttgttcatccaggctgcccgaggccgcagcgaagcgctggatcacacgctg
atcttcggcccgcccggtctgggcaagaccacactggccaatatcattgcccaggaaatg
ggcgtgtcgatcaagagtacttccggcccggtgctggagcggccaggggatctggctgcg
atcttgaccaaccttgagcccaatgacgtgctgttcatcgatgaaatccatcggctgtca
ccgattgtcgaggaagtgctgtacccggcaatggaagactttcagctcgatatcatgatc
ggtgagggacctgcggcgcgttcgatcaagcttgatctgccacccttcacgctggtgggc
gcgaccacgcgtgcgggcatgctgaccaaccctctgcgtgaccgtttcggtattgtgcag
cgcctcgagttttacaatattgctgatctttcgacgatcgtgtcgcgttcggccggcatt
ctggggctggtcatcgagccgcagggggcgttcgagatagccaggcgcgcgcgaggaaca
ccacggatcgccaaccgcctgctgcgtcgggtgcgggacttcgccgaagtgcgtggcaac
gggcagattacccgtcagacagctgacaaggcgctgaacctgctggatgtcgacgaacac
ggtttcgatcatcaggaccggcgtctgctgctgaccatgatcgagaagtttgacggtggt
ccggtaggtgtcgacagcctggcggcggccatcagtgaagaacgtcacacaattgaagac
gtgttggagccctatttgatccagcaaggctatatcatgcgcacacctcgcgggcgcgtg
gtcactcgtcatgcgtacctgcatttcgggctgaatatcccctcgcgaatgggggagatg
ccggcagcgggtgattttgtcgatgacccggcggatttatag
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