Pseudomonas tremae: I9H09_08635
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Entry
I9H09_08635 CDS
T08237
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ptre
Pseudomonas tremae
Pathway
ptre02020
Two-component system
ptre02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I9H09_08635
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I9H09_08635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ptre02022
]
I9H09_08635
02035 Bacterial motility proteins [BR:
ptre02035
]
I9H09_08635
Two-component system [BR:
ptre02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
I9H09_08635
Bacterial motility proteins [BR:
ptre02035
]
Flagellar system
Flagellar assembly proteins
Others
I9H09_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA_16
AAA_2
AAA
HTH_20
MerR
HTH_30
AAA_3
FleQ
HTH_11
AAA_19
HTH_23
HTH_24
nSTAND3
Sigma70_r4_2
HTH_28
AAA_7
AAA_22
ATPase
HTH_17
HTH_1
RsiG
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
UQB38394
LinkDB
All DBs
Position
1868153..1869565
Genome browser
AA seq
470 aa
AA seq
DB search
MSINVLLVEDDRALREALGETLELASYGYKAVGSAEEALLAVEAQPFNLVVSDVNMPGMD
GHQLLSLLRSRHPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIALVARHALG
RLGPAESDGPIAVEPASVQLLNLASRVAKSDSTVLISGESGTGKEVLARFIHQNSPRADK
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPMGLQA
KLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWQA
LRQRTADILPLAERLLAKHVNKMKHAPVRLSAEAQQCLVGYPWPGNVRELDNAVQRALIL
QQGGVIQAQDFCLSGPVTGLPAAVVEAAASLPVMSVAENANAGVSPESVGALGDDLRRRE
FQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtgctattggtcgaggatgaccgtgcattgcgcgaagcgctgggcgaa
accctggagctagccagctatggctacaaagcggtcggctctgccgaagaggcgttgctg
gcggtcgaggcgcaaccgttcaatctggtggtcagcgacgtcaacatgccgggcatggat
ggccatcagttactgagcctgctgcgcagccggcatccgcagttgccggtgctgctgatg
acggcgcacggcgctgtcgagcgagcggtggacgctatgcgccagggtgcagccgattac
ctggtcaagccctttgagcccaaagcccttatcgccttggttgctcggcacgcgctcggg
cgtctggggcctgccgagagtgacgggccgattgccgtcgagcctgccagcgttcagtta
ttgaacctcgccagtcgggtggcaaaaagcgactccacagtcctcatttccggcgagtcc
ggtactggcaaggaagtactggcgcgtttcattcaccaaaattcgccgcgtgccgataaa
ccgtttatagcgatcaactgtgcggccattcctgacaacatgctcgaggccaccctgttc
ggtcatgagaaaggctcgtttaccggcgctattgcagcgcaggccggcaagttcgagcag
gctgacggcgggaccatcctgcttgatgaaatttccgaaatgcccatggggcttcaggcc
aagctgttgcgggtgctgcaggagcgagaggtagagcgcgttggagcgcgcaagccgatt
acgctggatatccgtgtcgtggctaccaccaaccgtgatctggcgggcgaagtggcggcg
gggcgctttcgtgaagatctgttttatcgtctgtcggtgtttccactggcctggcaggcg
ttgcgtcaaaggactgccgatattctgccattggccgagcggcttcttgccaagcatgtc
aataaaatgaagcatgcgccggtccggctttctgccgaagcgcagcagtgtctggtgggt
tacccctggccgggcaacgtgcgagaactggataacgccgtgcagcgcgctttgattttg
cagcagggcggcgtgattcaggcgcaggatttctgtctgtcggggccagtcaccggcttg
ccagcggcggttgtagaggctgcagcgtccttgcctgtcatgtccgtcgcggagaatgcc
aatgccggtgtcagtcccgagtcggtcggcgcgttgggggatgaccttcggcgtcgcgag
tttcaaatgatcatcgacacgctgcgttcggagcgcgggcgtcgcaaagaagccgctgaa
aggctgggtatcagcccgcgtacattgcgttacaagcttgctcagatgcgcgacgcaggt
atggacgtcgaggcttatctgtttgccacttga
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