Pseudomonas tremae: I9H09_11325
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Entry
I9H09_11325 CDS
T08237
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
ptre
Pseudomonas tremae
Pathway
ptre02010
ABC transporters
ptre03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I9H09_11325
03070 Bacterial secretion system
I9H09_11325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptre02000
]
I9H09_11325
02044 Secretion system [BR:
ptre02044
]
I9H09_11325
Transporters [BR:
ptre02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
I9H09_11325
Secretion system [BR:
ptre02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
I9H09_11325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_18
AAA_29
AAA_30
DUF87
PRK
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UQB38891
LinkDB
All DBs
Position
2484578..2486740
Genome browser
AA seq
720 aa
AA seq
DB search
MNDSEMGARTPDNAPRLDTGLASLVMLARFHQVAASPEQLAHEFGSPDQSLSQDSLLLAA
RKLGLKAKAAMTNTERLDRTPLPAIAVDNNGGFFIIARLDQGKALIHDPLAQRPEVITFE
ALQARWTGQLLLIRSEAGTPGESSSFDFTWFIPAIVKYRKLLGEVMLVSFVLQIFSLITP
LFFQVVMDKVLVHHGLTTLDVIAVGLAGVMLFESALSGLRTYVFAHTASRIDVELGSKLF
RHLITLPLSYFQARRVGDSVARVRELENIRNFLTGNAITLLLDVLFSVVFIAVMFYYSGW
LTLIVLLSLPLYILVSVLITPVLRKRLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQA
IRKWDNQLAGYVAAGFKTQNLSTIANESVSLIGKLVTVATLWFGARLVIDGQLSVGQLIA
FNMLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRNELSQVNRSALPPIKGRIEFD
QVHFRYRPDGSEILRGINLVITPGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGM
DLALADVSSLRRQIGVVLQDNMLFNRSIRENIALSDAGAPLEAVMQMAKLAGAHDFILEL
PEGYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIVQQNMQAI
CKGRTVIIIAHRLSAVRDANRIVVVDRGQIVEQGSHTELLTHQAGHYSRLHRLQQGGSHV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcggaaatgggcgctcggacgcctgacaatgcccctcgtctcgacaccggc
ctggcctcgctggtcatgcttgcgcgcttccatcaggtagcggcttcgccagagcaactg
gctcatgagtttggtagtcctgatcaatccctgtcgcaagacagcttgttactggcagcc
cgcaaactcggtttgaaagccaaagcggccatgaccaacactgagcgtctggaccgtaca
ccactccccgccatagcagtggacaacaacggcgggttcttcatcattgcgcgcctcgat
caaggcaaggcgttaattcacgatccattggctcagcgccctgaagtcattaccttcgag
gccttgcaggcacgctggaccggacagctgttacttattcgctcggaggccggcacgccg
ggcgagtcttcaagtttcgatttcacctggttcattcctgccattgtcaaataccggaag
ttgctgggtgaagtgatgctggtctccttcgtcctgcagattttctcgctgatcacgccg
ctgttctttcaagtagtgatggacaaggtacttgtccatcacggcctgacgactcttgac
gtcatcgctgttggccttgccggggtcatgctgtttgagtcggccctgtccggcttgcgc
acctacgtatttgcgcataccgccagccgcatcgacgtagagctgggttcgaagctgttt
cgtcacttgatcacgttgccactctcatactttcaggcgcgccgcgtaggtgattcggta
gcgcgtgttcgcgaactggaaaacatccgtaacttcctgaccggcaatgccatcaccctg
ttgctggatgtactgttctcggtggtgttcattgcggtgatgttttactacagcggttgg
ctgacgttgatcgtattgctgtccctgccgctctacattctggtgtcggtgcttatcact
ccggttttgcgtaagcgcctcaacgacagttttgctcgtggtgcagagaatcaggcgttt
ctggtcgaaactgtcaacggtatcgacacccttaaatccatggcggtagaaccgcaagcc
attcgaaagtgggacaaccagctggcgggttatgttgctgcgggcttcaaaacccagaac
ctgtcgaccatcgccaatgaaagcgtctcgctgattggcaaactggtgactgtcgcaacg
ctgtggttcggtgctcgtctggtgattgacggccagctttcggtggggcagttgattgcg
ttcaacatgctggccggtcgtgtcgctcaaccgatcatgcgccttgcccaactgtggacc
aacttccagcaaaccggtgtatcggtccagcgtctgggcgacatcctcaatacccgtaac
gaactttcgcaagtcaatcgcagtgcgttgccacctatcaaagggcgtatcgagttcgat
caggtgcattttcgctatcgcccagacggttcggagatcctgcgaggtatcaaccttgtt
attacgccggggcaagtcatcggtgtggtggggcgttccggttcgggcaagagcacattg
acgcgtttgttgcagcgcctctatgtgccggagcgtggtcgggtgttggtcgatggcatg
gacctggccctggcagacgtttcgtccttgcgccgccagatcggcgtggtgctgcaggac
aacatgctgttcaaccgcagcatccgcgaaaacatcgccctgagtgatgccggggcgcct
ttggaagcggtgatgcaaatggccaaactggctggcgcccacgacttcatccttgagctg
ccggagggttacgacacgatggttggcgagcacggcgcatcgttatctggcggtcagcgc
caacgcatcgctattgctcgtgccctgatgggcaacccgcgaatcctgatcttcgacgag
gccaccagtgcgctggactatgagtctgaacgcattgttcagcagaacatgcaggctatc
tgcaaagggcgcacggtcatcatcatcgcgcatcgactgtccgccgttcgcgatgccaac
cgcatcgtcgtcgtggatcgcgggcaaattgtagagcagggctcccacaccgaattgctg
acccaccaagcgggtcactactcgcgtctccaccgcttgcagcaaggaggcagtcatgtc
taa
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