Pseudomonas tremae: I9H09_13905
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Entry
I9H09_13905 CDS
T08237
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ptre
Pseudomonas tremae
Pathway
ptre02025
Biofilm formation - Pseudomonas aeruginosa
ptre03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I9H09_13905 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I9H09_13905 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptre02044
]
I9H09_13905 (tssM)
Secretion system [BR:
ptre02044
]
Type VI secretion system
Imp/Vas secretion system core components
I9H09_13905 (tssM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_16
SRC-1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UQB34700
LinkDB
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Position
complement(3072416..3075919)
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AA seq
1167 aa
AA seq
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MKTLFKKLVTLLCSTWLWSLLVVGALAIIIWAFGPLLAVADRRFWESPSARLLTISALFL
VWGLWNVFANWRSGLKRKLAAESQTGQERLRQSLAREKEQLELFSRFKDARQVIKNSALY
GELGARGRQALPWYMLMGPQGSGKTSLLDFSGLDFPLDRSGRKLTRDASSTSSCSWYFTE
QAILLDTSGRYLDQPEPEVDGSAWKTLLELLRGRHRTHPLGGVLITLPVGILLDERDNRL
QKLADDVRVRLDEIYRTLHVDVPVYLVLTKADSIAGFDEFFDQLSLEESAQVFGATFRSG
QQGSDVGVLGMEFDNLLQRLGSQVIGRIHQERDSRRRGAMLEFPNCLGSIERRLGLFAEL
AFSGNRYQRASQLRGFYLTRAPHLVQRGDQPGLNEDSGLPDQHVGKARFIHDLLRHVIFP
ESDLATLDKKTWRKIQWRQRGMYAAALLFLGAFGALWVTGFSASHDRLETLRVLGEQLTR
QRSSLTADDDLLAVLDTLNMRHQAALVFPDSNDVALYERTGLYQGQAVNDVLLSAYHVEL
QTQLLPRIVRMFEARILASLEDRELLLSSLRAYLMLVNSEHRIPSALEEWTAADWSIRYA
GHAQAQRELNQHFKRLMALPFAYPVNDALVAQARKTLRNESFAHVVYRALREKAHSLPDY
SLGRHTGPQETVLAGTDYRIPGLYTRHGYEQYFVTHGTDVVTEIMRNNWVLGESTPFSAA
QLRALMVELEKLYFRDYADHWAEAIGRVSLQPFEGTRQAALQMAGLTAAHSPLLQLLNEV
RDNTRFPTLADRLDSLKAQAGKAVATSAVPTQLTETGEQLQASVANALPDTAKRALQRRF
DTLHRLLDGENGPAADLTKALSAIDELQMQMAALSRSGQPERAAYEMAKGRMSGQQDALS
KLRNAATILPQPVGGWMNTLAEDSWSFVLHQSHQYLNQRYKSELYSFYSQSLDKRYPFHA
HSSSDVALNDFREFFKAQGIAERFFENYLKPFVSGDPGRYRLRSIDGYSLPMSHAYLDQM
ASVYNIRKSFFAESAQEPQIRFTLEPHTLDPGVRRAEFRLGDQSLEYQHGPIVPTPFMWP
VDTLDGRASLVMEGMVGRPLGIEKNSGPWSLFRLMDLMQTEPLKGRDVLLLKADVGGMRA
NYLLSSQRAPNPFDMSALRDFRMPAQL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccttgttcaagaaactcgtcacactattgtgcagcacctggctctggtcgctg
ctggtggtgggcgcactggcgataataatctgggcattcggtcctttgctggcagtagcc
gaccgcaggttctgggagagccccagcgcgcgcttgctaacgatcagtgcgttgtttctg
gtctgggggctctggaacgttttcgccaactggcgcagtggtttgaaaagaaaacttgct
gcagaaagccagacaggtcaggagcgtctgcgccagtcccttgccagagaaaaagagcag
ctggagctcttcagtcgattcaaggacgcccggcaggtaatcaagaattccgctttatat
ggtgagttgggtgcgcggggtcggcaggcgctgccctggtatatgctgatggggccgcag
ggcagcggcaagactagccttttggacttttcaggactcgatttccccctcgacaggtcc
ggtcgcaagctgacacgtgatgcgagcagtaccagcagttgtagttggtactttactgag
caggcaatccttctggatacatcgggccgctaccttgatcagcccgagccggaggtagac
ggcagtgcctggaagacgctgcttgaattgttgcgcggccgtcaccgaacacacccgctc
ggtggtgtgttgatcaccctgccggtaggcatactgctcgatgaacgtgataatcgcctg
cagaaacttgctgacgatgtacgtgttcgcctcgacgagatttatcgaaccttgcatgtc
gatgtacctgtttatctggtgttgaccaaggctgactccatcgccgggtttgatgagttt
tttgaccagttgtccctggaagaaagtgcgcaggtctttggagcaactttcaggagtggg
caacagggaagcgatgtcggcgtcctcggtatggagttcgacaacctgctccagcgcctt
ggcagccaggtgattggccgcattcatcaagagcgcgacagtcggcgccgcggggcgatg
ctcgagttcccgaactgccttggaagcatcgagcgccgactcggtctcttcgcagagctt
gcgttttccgggaatcgctatcagcgtgccagtcaactgcgtggtttttacctgacccgg
gcgccgcatctggttcagcgcggcgatcagcctgggctgaacgaggatagcgggctgcct
gatcagcacgtcggaaaagcacggtttatccatgacttgttgcgccatgtgattttcccg
gaatccgatctggccacgctggataaaaaaacgtggcgaaagattcagtggcgtcagaga
ggaatgtacgctgcggcactgttgtttctgggggcgttcggagcgttgtgggtaacaggt
ttcagtgccagtcatgaccgacttgaaacgcttcgtgtccttggcgagcaactgactcga
cagcgttcatcactgactgcagacgatgatctgttggctgtcctggatactttgaacatg
cgtcaccaggccgcccttgtatttccagacagtaacgatgtggcactttacgaacgcacc
gggctgtatcagggacaggccgtcaacgatgtgcttctaagtgcctaccatgtggaactg
caaactcaactacttccacgaatagtgcgcatgttcgaagcccggatactggccagcctg
gaggatcgcgagcttttgctgagcagtctgcgtgcctatctgatgcttgttaacagcgag
caccggataccttccgcacttgaagagtggaccgccgccgattggtcaattcgttatgcc
ggccatgcgcaggcccagcgcgagcttaaccagcacttcaagcgcttgatggctctgcct
tttgcttatccggtcaacgatgcacttgtggcccaggcgcgtaaaacgctgcgcaatgaa
tcttttgcccacgtggtctatcgagcgttgcgtgaaaaagcacattcattgcccgattac
agtcttggccggcacaccgggcctcaagaaactgtattggcagggacagattatcgaatt
ccagggctctacactcggcatggctatgagcagtattttgtcactcacggcactgacgta
gtgactgaaatcatgcgcaataactgggttcttggtgaaagtacaccgtttagcgcagcg
caactgcgcgccctgatggttgaattggaaaagttatattttcgtgattatgccgatcac
tgggccgaggctatcggcagggtttccttgcaacccttcgaaggaacccggcaggctgcc
ttgcaaatggctggcttgacggcagcccattcgccgttgcttcagttactgaacgaagta
cgagataacacgcgttttcccactcttgcagaccgtcttgacagcctgaaggcgcaagct
ggtaaagcggtggcgacatctgcagtgcccactcaactcaccgagactggcgagcaattg
caggcatcggttgccaacgctttgcccgatacagccaagagggccttgcagcgtcgtttc
gatacgttgcatcgcttgctggatggggagaatgggccggctgccgatctgactaaagct
ctgagcgctattgatgaactgcagatgcagatggctgcgctgagtcgttccggtcagcct
gaaagggctgcgtacgaaatggccaaggggcggatgtcaggacagcaggatgctttgagc
aaactgcgcaatgcagcgacgatattgcctcagcctgtcggtggctggatgaatacgttg
gcagaagatagctggagcttcgtgctgcaccagtctcatcaatacctcaatcagcgttac
aagtccgaactctacagcttctacagccagtcactcgacaaacgatatccgtttcacgct
catagcagcagtgacgtagcacttaatgattttcgcgagttcttcaaggcgcagggtatc
gcggaacgcttcttcgagaattatctgaagccgtttgtgagcggcgatcccggccgctat
cgcctgcgcagcatcgatgggtacagtttgccgatgagccatgcgtatctggatcagatg
gccagtgtttacaatattcgtaaaagcttctttgccgagagtgcccaggagccgcaaatc
cgcttcacgcttgagcctcacacccttgaccccggcgtgcgtcgagcagagtttcgtctt
ggtgaccagtcgcttgagtatcaacacggtccaatcgtgccgacaccgttcatgtggccg
gttgacaccttggacggacgcgccagcctggtcatggagggcatggtcggacgcccgctt
ggcatagagaaaaattccgggccgtggtcgctgttccgtctcatggatttaatgcagacc
gagcctttgaaaggacgagatgtgcttctgctcaaagcggatgtgggcggaatgcgagcc
aactatctactgtcgagccagcgtgcaccgaacccgttcgatatgagcgcattacgtgac
tttcgtatgcctgcgcagctttga
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