Pseudomonas tremae: I9H09_13915
Help
Entry
I9H09_13915 CDS
T08237
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
ptre
Pseudomonas tremae
Pathway
ptre02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I9H09_13915 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptre02044
]
I9H09_13915 (tssK)
Secretion system [BR:
ptre02044
]
Type VI secretion system
Imp/Vas secretion system core components
I9H09_13915 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UQB34701
LinkDB
All DBs
Position
complement(3076806..3078137)
Genome browser
AA seq
443 aa
AA seq
DB search
MNSHKVIWQEGMLLRPQHFQHNDRYYDHQLRVRTRLAGPYNWGFTAVAIDPQFLGSGQIV
LAHASGILPDGSVFDIRDHDTPLVLDIPANTSNMAVYIALPIVAGNCVEARGHEQPDAVT
RFTAYSASISDSNAGEDSSTPVFCARPEFRLLLGEPRGESAYAMLKLCHILICGPDRSLT
LDAAFSPTSLCASGSRYLMSCLKEVSALLLHRGDVIAERIGSTGQASGAELGDFMMLQIV
NRNALILRHFLNIGHIHPEELYRLLLTLLGELSTFGDDSRRPRLESSYQHSDQGATFRSV
MLAIRQMLSMVLEQHAQELELQPRQYGVLVSPRVDSELLGAASFVLAARAHCDAEELRLR
LPSHLKIGSVESIRELVGLHLPGIRLRPLPVAPRQIPFHAAKTYFVLDLDARERETIDKS
GGFAFHVSGEFPGLELQFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacacaaggtcatctggcaagaaggcatgttgttgcgtccgcagcacttccag
cataacgaccgttattacgatcatcagttaagggttcgcactcggttggcaggcccttac
aactggggattcaccgcagttgcaatcgatccgcaatttctggggtcgggccagatcgtt
cttgctcatgcctcgggcatcctgccggacggcagcgttttcgatatacgcgatcatgac
acaccactagttttggacatcccggccaatacctcaaacatggcggtgtacattgccttg
ccgatagtggcaggcaattgcgttgaagcacgcggtcatgaacagcctgacgctgtgacg
cgcttcacagcctattcagccagtatttctgattcaaacgccggggaagacagttcgaca
ccggtcttctgtgcacggccggaatttcgattgttactgggcgagcccaggggcgaaagc
gcgtacgcgatgctcaagctgtgtcatatccttatctgtggccctgacaggtcgctaaca
ctggatgcggcattttctcccacgtccctgtgcgccagtggctcccgttatctgatgtcc
tgtctgaaggaggtttcagctctgcttctccaccgcggagacgtgattgccgaacgaatc
ggttcgacggggcaggcgagcggggcggaactgggtgatttcatgatgctgcagatcgtc
aaccgcaatgcgttgatacttcggcactttctgaatatcgggcatatacatccggaagag
ctgtatcggttattgctgacgctgttgggcgagctgtcgacgtttggcgatgacagccgc
cgtcctcgcttggagagcagttatcagcacagtgatcagggcgcaacgttcaggagcgtg
atgctcgctattcggcagatgttgtcgatggtgcttgaacagcatgcgcaggaactcgaa
ttacagccccggcagtacggtgttctggtgtcgccgcgagtggacagcgagttgctgggg
gctgcgtcgtttgtcctcgctgcccgtgcgcactgcgatgctgaagagctgcgtctgcga
ttgccttcacacctcaaaataggttctgtggaaagtattcgcgagctggttggcttgcac
ttgccaggcattcgccttcggccactgcctgtggctccgcggcagattccgtttcacgcc
gccaagacctacttcgttctcgacctcgacgcgcgggagcgagaaacaattgataagtcc
ggaggttttgcctttcacgtttcaggcgagtttcccggacttgaattgcagttctgggcg
atcagaaattga
DBGET
integrated database retrieval system
