Pseudomonas tremae: I9H09_13935
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Entry
I9H09_13935 CDS
T08237
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
ptre
Pseudomonas tremae
Pathway
ptre02025
Biofilm formation - Pseudomonas aeruginosa
ptre03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I9H09_13935 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I9H09_13935 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptre02044
]
I9H09_13935 (tssH)
Secretion system [BR:
ptre02044
]
Type VI secretion system
Imp/Vas secretion system core components
I9H09_13935 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
ClpB_D2-small
NBD_SMAX1
nSTAND3
NACHT
TniB
Sigma54_activat
AAA_7
AAA_25
AAA_29
Clp_N
T2SSE
IstB_IS21
AAA_18
AAA_24
SLFN-g3_helicase
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
UQB34703
LinkDB
All DBs
Position
complement(3081172..3083775)
Genome browser
AA seq
867 aa
AA seq
DB search
MINPDLQQLVQALDVPTRIELEGTAERCVSRGSNRILVEDLLIALVERPDGMLVRALNDA
SIAAADFASLLLPPAEYCGASNPVFAAELVQWLQDALLISNLDLGQSQIDQAALILALLR
NPLRYADRPYQPLLAKINIERFRDFALAEQASGTSRTTASPSESLLERFTHNLTQQARRG
ELDPVLCRDDCLRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIVAGQVPDLLKNV
ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKSSPIPVILFIDEAHTLIGAGSQAGGSDA
ANLLKPALARGELRTIAATTWTEYRQYFEKDPALARRFQPVRVLEPTLEQAIIILRGLAP
LYERSHGVYLRDDAVVAAARLSARYISGRQLPDKAIDLLDTACARVRVSLVAVPERIERL
RADRTQYQRHYDAVQRDAAAGLLVDEKVLNTLASDLSRIQQELPALEVMWADQQSAARRL
LDLRSHHAHPAVKREGPVNPNSKCRSTEAQESDLVQARQTLMDTQADDRLVSFEVCPRLI
AEVVNAWTGIPLSQLAQAHSSEITGLSSALRLRIRGQEPAIQVLEQSVRVSAAGLSALNA
PSGVFLLTGPSGVGKTETALALADLLYGGDRFLITINMSEFQEKHTVSRLIGAPPGYVGY
GEGGMLTDAVRQKPYSVILLDEVDKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILM
TSNLGGDLIHSLCRDGKRPESDTLVRAINPVLVGHFKPALLARMRVLPFYPISGLVLQEL
IELKLDHLVEKLEGRGLTFSYSEELVFHLLENCAQLDSGARLIDHVLASQLTPLIADALL
LASNSDAMLLTVHATLDSSGDIVCECK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacccagacctgcagcaactcgttcaagctcttgacgtgcccactcgcatagag
cttgaggggacagccgagcgttgcgtttcccggggcagcaacagaattcttgtcgaagat
ctactgattgccttggtggagcgtcctgacggcatgctagtacgtgctttgaatgacgct
agtatagcggctgccgatttcgcaagcctcttgctcccgccagctgaatactgtggggct
tccaacccggtatttgctgccgaacttgttcagtggcttcaggacgccttattgatttcc
aatctggatttggggcagagccagattgatcaggctgcacttattctcgctttgctgcgt
aaccctttgcgttatgccgatcgcccctatcagccgctgctggcaaaaatcaacatcgag
cgatttcgtgacttcgcccttgcagagcaggcatccggaacatcccgaactacagcgagc
ccaagcgagtcgcttcttgagcgcttcactcataacctgacgcaacaggccaggaggggt
gagctggatccggtactgtgccgtgacgactgtttgcgtcagatggtcgacatactggct
cgtcggcgcaagaacaacccgattgtggtaggcgaggccggggttggcaaaactgcgatt
gttgaagggttggcgctgagaatcgttgcaggacaggtccctgatctcttgaagaacgtc
gagcttttatctctggatatgggattgcttcaggcaggcgccagcatcaagggtgagttt
gaacgtcgcttgaagggagtcatcgatgaggtcaagtcttcgccgatacctgtcattctt
ttcattgacgaggctcatacgctgatcggggccggttcgcaggcgggaggttcggacgca
gccaatctgttgaaaccggcactggctcgcggcgaattgcgcaccattgcagcgactacc
tggaccgagtacaggcaatacttcgagaaagaccctgcgcttgcgcggcgttttcagcct
gtgcgagtactggaaccaacgttggagcaggccatcatcattttgcgtgggctcgccccg
ctatatgagcgcagccatggcgtctatctgcgcgatgacgctgtggttgccgctgctcga
ctatcggcacgttatatttcggggcgacaactgcctgacaaggcaatcgatctgctcgat
acggcctgtgctcgcgtgcgagtcagtctggttgccgtgcccgaacgcatcgagcgtctg
cgagcagatcggactcaataccagaggcattatgacgcagtgcagcgtgacgcagctgcg
gggcttcttgtggatgaaaaagtgttgaatacactggcatcggatctttcacgcattcag
caagagttgcccgcactggaagtcatgtgggctgatcaacagagcgccgctcggcggctg
ctcgatctacgcagccatcacgcacaccctgcagtaaagcgcgaaggcccggttaaccca
aacagtaaatgtcgttccacagaggcacaggaatccgatttggttcaggcccggcaaacg
ctcatggatactcaagctgatgaccgtcttgtcagttttgaagtgtgtccgaggctgata
gcggaagtggtcaatgcctggacaggcattccgttgtcgcagctggcgcaagcgcacagt
tcggaaattaccggcctctcttctgcgttgcgtctgcgcattcgtgggcaggagccggcg
attcaggtacttgaacaatccgtaagagtatctgccgccggattgagtgcgctcaatgca
ccgtcgggagtattcctgttgacgggccccagcggagtaggcaagaccgaaacagccctc
gctcttgctgacctgctgtacggcggtgaccgttttcttatcacgatcaacatgtccgag
tttcaggaaaagcacacggtctcgcgcttgatcggagcgccacctggttatgtcggttat
ggggaagggggcatgctgactgatgctgtgcgacagaaaccttactcggtaattttactt
gatgaggtggataaagctgatcccgatgtattgaacctgttctatcagattttcgataaa
ggcgtagcgaacgatggcgaggggcgagaaatagacttccgtaatacgcttattctgatg
acctccaaccttggcggcgaccttatacattcactctgccgagacggcaaaaggccggaa
agcgatacgctggtgcgtgcgataaacccggtgcttgtgggtcacttcaaacccgcattg
ctcgccagaatgcgcgtgcttcctttctatcccatcagtggcctggtgcttcaagagctg
attgaattaaagctggatcatcttgtggagaagcttgaaggacgcggactgacgttcagc
tattccgaggaactggtttttcatctgcttgaaaactgcgcgcaactcgacagcggtgcc
aggctgattgaccacgtactggcgtcgcaactgaccccgctcatcgcggacgctttgctt
cttgcgagcaacagcgacgctatgcttctcacggttcacgctacgctggacagttcgggc
gacattgtctgtgagtgcaaataa
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