Pseudomonas tremae: I9H09_13960
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Entry
I9H09_13960 CDS
T08237
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
ptre
Pseudomonas tremae
Pathway
ptre02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I9H09_13960 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptre02044
]
I9H09_13960 (tssB)
Secretion system [BR:
ptre02044
]
Type VI secretion system
Imp/Vas secretion system core components
I9H09_13960 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
TMP_C
Motif
Other DBs
NCBI-ProteinID:
UQB34707
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All DBs
Position
complement(3088571..3089068)
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AA seq
165 aa
AA seq
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MAKEGSVAPKERINVTFKPAVGGAQEEIELPLKLLVLGDFTQRADGRKLEERKAISIDKN
NFDDVMAKQELEILLSVPDRLQSKDDAGDLAFSIKVGSMKDFNPASLVEQIPELKKLMEL
RNALMALKGPLGNTPAFRKAIENVLADKESRHKVMNELGMDTAAQ
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggttctgtggcacccaaagaaaggattaacgtcactttcaagcccgct
gtcggaggggcgcaggaggaaatagagctcccattaaaactattggtcctgggcgatttc
acacagcgcgccgatggccggaagctcgaagagcgtaaggctatcagcatcgacaagaat
aacttcgatgatgtcatggccaagcaagagcttgaaattctactgagtgttcctgatcgc
ctgcaatctaaagatgatgctggtgatctggccttcagcatcaaggtcgggtcgatgaaa
gactttaacccggccagcctggtggaacaaattcccgagcttaaaaagttgatggaatta
cgcaacgccttgatggcacttaaagggccactcgggaatacgcctgcttttcgcaaggca
atcgagaacgttctggctgacaaagagtcgcgccataaagtaatgaatgagttgggcatg
gatacggcagcacagtag
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