Pseudomonas tremae: I9H09_14115
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Entry
I9H09_14115 CDS
T08237
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00550
Peptidoglycan biosynthesis
ptre01100
Metabolic pathways
ptre01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I9H09_14115 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I9H09_14115 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptre01011
]
I9H09_14115 (mrdA)
Enzymes [BR:
ptre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I9H09_14115 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ptre01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I9H09_14115 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MAP
Motif
Other DBs
NCBI-ProteinID:
UQB34734
LinkDB
All DBs
Position
complement(3119172..3121061)
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AA seq
629 aa
AA seq
DB search
MPNPIPLKDHEKETRLVNQRLIACAVLVGLLATCLVARMYFLQVTEFEYHSTISENNRVH
VLPIPPERGLIFDRNGEVLADNRPSFNLTLTRERAGDWHKVIDELMTLLELPDEDRILFD
KELKQVRHPFEPATLLYELTEEQIATLAVNQYLLPGVDVAAQFVRHYPLGAHFAHSIGYV
GRINEKEAAHLDNEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP
VPGKNITLTLDAHLQAAAEDALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISFK
QYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVTASTKVFDPGYFQLPDFD
HKYRNWNHSGDGWVDMDTAIMRSNDTYFYTLAHKLGIDRLHDYMTMFGIGQKVSLDMFEE
AAGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLA
MEVGNAAPVDEHPMPNIVLHDPNEWNQVNTGMQMVMHDPRGIARDAAKGAQYRIAGKSGT
AQVVAIKQGERYNRLKTLERNRDNALFVGFAPADHPKIVVSVTIENGEAGGRVAGPVVRE
ILDAWLLDSDGKLKPQYAVPTKATGNPHA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccaatccccctgaaagaccacgagaaagagacgcggctggtcaaccagcga
ctgattgcctgtgccgtgctggtcgggctgctggccacctgcctggtggcgagaatgtac
ttcctgcaggtcaccgagttcgagtatcactcaacgatctccgaaaacaaccgcgtccat
gtactgccgattccgcctgagcgcggtttgatctttgaccgtaatggcgaagtgctggcc
gacaatcggcccagtttcaatctgaccctgactcgtgagcgagcaggtgactggcacaag
gttatcgacgaactgatgaccctgctggaactgccggatgaagaccgtattctgttcgac
aaagagctgaaacaggtacgtcatccattcgagcctgcgaccctcctgtacgaactgacc
gaagagcagatcgccacattggcagtcaatcagtacctgttgccgggcgttgatgtcgcg
gctcagttcgttcgtcactacccgctgggcgcacattttgctcactctatcggttacgtt
gggcgcatcaacgaaaaggaagcggcgcacctcgacaacgagtatcgcggcactcaatcc
atcggcaaaaccgggatagagcgcttctacgagtcagagctgcacggtcatgtgggttac
gaagaagtcgagaccaatgcccaggggcgcgtactgcgggttctgaaacacactgacccg
gtgcccggcaagaacatcaccctgacgctggatgcgcatcttcaggctgctgcggaggac
gcgctgggtgatcgtcgtggttcggtagtggcgctggacccggaaacaggcgaggtgctg
gcgatggtcagcaagccgagcttcgaccccaatctgttcgtgaccggcatcagcttcaag
caatacgctgcattgcgcgattccatcgatcggccgctgttcaaccgcgtgttgcgcggt
ctgtatgcccctggctcgacggtcaagccggaagttgccattgccggcctcgacagcggt
gtggtcactgcctcgaccaaggtcttcgaccctgggtacttccaactgccggacttcgat
cacaagtaccgcaactggaaccacagcggtgatggctgggtggacatggacaccgcgatc
atgcggtccaacgacacgtacttctataccttggcgcacaagctgggcatcgaccgactg
catgactacatgaccatgttcggcattggccagaaagtctcgctggacatgttcgaggag
gccgccgggctgatgccgtcccgcgaatggaagcgtgcaacgcgccgtcaggcctggttc
cccggcgagacggtaatcctcggtataggtcagggctacatgcaggtcacgccattgcaa
ctcgcccaggccacttcgctgatcgccagcaagggcgtctggcatcgtccgcatctggcg
atggaagtcggcaatgccgcgccggtcgatgagcatcccatgcccaatatcgtgctgcat
gaccccaatgagtggaatcaggtcaacaccggcatgcaaatggtgatgcacgatccgcgc
ggtatcgcccgtgacgccgctaagggcgcgcagtaccggattgccggcaagagcggtacg
gcgcaggtggtggcgatcaagcagggtgaacgttacaaccgtctcaagacccttgagcgt
aaccgcgacaacgccttgttcgtcggtttcgccccggctgaccatccgaagatcgtagtg
tcggtgaccatcgagaacggcgaggcgggtggtcgggtggccggtccggtggtgcgggaa
attctcgacgcctggctgctcgacagcgacggcaagctcaagccgcaatacgcagtgccc
accaaggcgacgggcaacccgcacgcctga
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