Pseudomonas tremae: I9H09_16310
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Entry
I9H09_16310 CDS
T08237
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_16310
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I9H09_16310
Archaeal homologous recombinant proteins
I9H09_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
MMR_HSR1
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UQB35134
LinkDB
All DBs
Position
3625826..3629473
Genome browser
AA seq
1215 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT
KKLQASRQILTDLDSEQVLSNQSKREFEQLIENRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTVIYSQLGRRAYSKSKEAEEALKTLTAQASNIIPLAPEQLVELEQRL
ANAQQQLKAHQAQQRQLELKQQWLIELHRLRDEQLAAQESLTRTQQSWDERSAERQTLGQ
LERLDPQRHRFARRLTLNALLTPLAEQIRQFQAQQTALQSQQQQLETRRTEAQASLLAAQ
QAHGLAKPLLQQAFDAQNTLNHLAQELAKAADLHQQTGQLCAEGQASLQTLLDKQQQVAQ
RLERIATQLEQSSELAPLAQAWSAWRDRLKSLTLIANRLRHGQSELPALQQRASDADQQL
TEQRQTLELLYREADCEVDAVTEQVQILGSLLQDNRKQQRAFEDLARLWASQQEVDHQFA
ELAQQQLGAQQQREQLNTEGIRVRDELTVAEQTLSVTRQLLERQRLARSASVEELRVQLQ
DDQPCPVCGSVEHPWHQPEALLQSLTHHDDNEQAGAQKAVDLLTEQRNHLREQVGGVIAR
QKELLRQHEQLTLRHQALMPDLEAHPLAAQLLDRDPDKRDDWLSQQLRQLNDVIARDEQR
QEALLTLQKDAARLQQQLQTAAEASQTAAHHVAEQLKQLDVDQQRLEEELTAFTPLVSPQ
VLEGLRNDASATVMQLEQQVTQRLDQLEQQNEEQQEQRERQQKIEKEQIEQQARLQRQTE
LALDVTRLGEQRQARQQTLADLLGDHATAEQWQQTLENSIEQARQAEASAAQTLQDLHGK
LIQLAAELKSGMHQQQTLQDELAQLDVQIGEWRAQHPQLDDAALDTLLTYDDAHVEQLRQ
QLQSIEKNLEQDKVLLQERDQRLQQHQAQHSDLSDAGQLTAELQGAQEQLAQSEQHCADL
RAELSEDQRRRNANSELQARITEANDEYLRWARLAALIGSAEGDRFRKIAQAYNLDLLVH
HANAQLKQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGST
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttgccattcgcctgaaaaacctcgcgtcgctggcgggtccgttcgaactg
gatttcaccgcagaaccgttggccagtgccggattgttcgccatcaccggccctaccggc
gcgggtaaaagtaccctgctcgacgctttgtgcctggcgctgttcggggccattccgcgg
ctgagcaatatcggccagtccaaggtcccggacatcgacggagacatcaccaccagcgac
ccgcgcaccttgctgcgccgtggcaccggcagcgggtatgccgaggtggatttcatcggc
atcgatcagcgccgctaccgcgcccgctgggaaaccaaccgcgcacgcgacaacgcgacc
aagaagctgcaggccagccgccagatactgaccgatctggacagcgagcaggtcctcagc
aaccagagcaagcgtgagttcgaacaactcatcgaaaaccgcctgggcttgaacttcgaa
cagttcacgcgtgccgtcatgcttgcccagagtgagttcagcgcgttcctgaaagcagat
gacaaggaacgcagcgaactgctggaaaagctcaccaacactgtaatctacagccagctc
ggccggcgtgcctacagcaaaagcaaggaagcagaagaagcgctgaaaaccctgaccgcc
caggccagcaacattatcccgctggccccggagcaactggtcgagcttgaacagcgcctt
gccaatgcacagcagcagctcaaggcccatcaagcacaacaacgccagttggaactcaag
cagcagtggctgatcgagctgcaccgcctgcgtgacgaacaactcgcggctcaggaaagc
ctgacccgtacgcaacagtcctgggacgagcgcagcgctgagcgtcagactctcggccag
ctggaacgcctggacccacagcgacaccgttttgcccgacgcttgaccctgaacgcccta
ctcaccccgttagctgaacaaattcgacagtttcaggcacagcaaactgctctgcaaagc
cagcaacagcagctggaaacccggcgcaccgaggcccaggccagcctgctggccgcccag
caggcgcacggtttggcaaaaccgctgctgcaacaggcctttgacgcgcagaacaccctg
aaccatctggctcaggaactggccaaggctgccgatttacatcagcaaaccggacaactg
tgcgctgaaggtcaggccagcctgcaaaccttgcttgataagcagcaacaggtggcacag
cgcctcgagcgtatcgccacgcagctggagcagagcagcgaactggccccgctggcgcag
gcgtggagcgcgtggcgtgaccgtttgaagtccctgaccctgatcgccaatcggctaagg
catgggcaaagcgaactgcctgccctgcaacaacgtgccagcgacgccgaccaacagttg
accgaacagcgccagacgctggaattgctgtaccgcgaagccgactgtgaagtcgatgcg
gtgaccgagcaggtgcagatcctcggcagcctgttgcaggacaatcgcaaacaacaacgc
gcattcgaagaccttgcgcgtttgtgggccagtcaacaggaagtggaccatcagtttgcc
gagctggctcagcaacagctgggtgcccagcagcaacgcgagcagctcaacaccgagggc
attcgcgttcgcgacgaattgaccgtcgccgaacagaccctcagcgtcacccggcaactg
ctggagcgtcagcgtctggcccgtagcgccagtgtcgaagagttgcgcgtgcaattgcag
gacgaccagccctgcccggtctgcggcagcgtcgaacatccctggcatcagcccgaggcg
ctgctgcaaagccttacccaccatgacgacaacgaacaagccggcgcgcagaaagccgtc
gacctgctgaccgagcaacgtaatcatctgcgcgaacaggtcggcggcgtgatcgcccga
cagaaagagctgctgcgccagcacgagcaactgaccctgcgtcatcaggccctgatgcca
gaccttgaagcgcatccgcttgccgctcaattgctggatcgcgacccggacaaacgagac
gattggctgagccagcaactgagacagttgaacgacgtcatcgcgcgtgatgagcagcgt
caggaggccttgctgaccttgcagaaagacgctgcgcgtttgcagcagcagctccagact
gcggcagaagccagccagacagctgcgcatcatgtcgccgaacaactcaagcaactggac
gtcgaccaacagcgtctggaagaagaactgactgcgttcacgccactggtgtcgccgcag
gtactcgaaggcctgcgcaacgatgcctcggcaacggtcatgcagcttgaacagcaagtg
actcagcggctggaccagttggagcagcagaacgaagagcagcaggaacagcgcgaacgt
cagcagaagatcgagaaagaacagatcgagcaacaggcccgtctgcaacgccagaccgag
ctggcgctggacgtcacccggctcggcgaacagcgccaggcccgtcagcagacacttgcc
gatttactgggcgaccatgccaccgccgagcaatggcagcagaccctggaaaacagcatc
gagcaggcacgtcaagccgaagcatcggccgcccagacgcttcaggatctgcacggtaag
ctgattcaactggccgccgaactcaaatcgggaatgcatcagcagcagactttgcaggat
gaactggcgcagctcgacgttcagatcggtgaatggcgtgctcagcatccgcaactggac
gacgcggctctcgacactctgctgacttacgatgacgcacatgtcgaacaactgcgtcag
caattgcagagcatcgaaaagaacctggaacaggataaggtcttactccaggagcgggat
cagcgcctgcaacagcatcaggcccagcacagcgacttgagcgacgccgggcaactgacc
gccgagctgcaaggggctcaggagcaactggcacaaagtgaacagcattgtgcggacctg
cgcgccgaactcagtgaagaccagcgccggagaaacgccaacagcgagcttcaggcgcgc
atcaccgaagccaacgacgaatacctgcgctgggcacgactggcggcactgatcggctct
gccgaaggcgaccgatttcgcaagatcgctcaggcctacaaccttgatctgctggtccat
catgccaatgcacagctcaagcaactggtgcggcgctaccgcctgaaacgcggcggcagc
atgcttggcctgctggtcatggacaccgagatgggcgacgaactgcgctcggtccactcg
ctctcgggtggggaaaccttcctcgtctcgctggcgctggcactgggcctggcgtcgatg
gcctccagcaccttgcgcatcgaatccctgttcatcgacgaaggcttcggcagcctggat
ccggaatcactgcaattggcgatggacgcgctggacggcttgcaggcacagggccgcaaa
gtcggcgtgatctcccatgtgcaggaaatgcacgaacgtattccggtgcagatcaaggta
cgtcgtcagggcaatgggttgagcacgattgaggtaggcagtacatga
DBGET
integrated database retrieval system
