Pseudomonas tremae: I9H09_16690
Help
Entry
I9H09_16690 CDS
T08237
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptre03009
]
I9H09_16690 (rluC)
Enzymes [BR:
ptre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
I9H09_16690 (rluC)
Ribosome biogenesis [BR:
ptre03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I9H09_16690 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
UQB35201
LinkDB
All DBs
Position
complement(3707741..3708697)
Genome browser
AA seq
318 aa
AA seq
DB search
MTNIAPPTPGVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRIVRKGEVRVNKGRTKPE
YKLQAGDIVRIPPVRVPERDEPVPVAQALLQRLEAAIVYEDKALIVLNKPAGIAVHGGSG
LSFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMA
LVRGNWAAAQKQVRAPLLKSNLRSGERMVEVNEEGKEALTIFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHAIAGDTKYGDENFSREIRDLGGKRLFLHAYMLTVPMPDGSKLNV
QAPVDEMWARTVERLSAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatattgcccctccaacccccggcgtccagctggttgaggttgcgccggaactt
gccggtcaacgcatcgataattttctgatcacttatctcaagggcgtgcccaagaccttg
atctaccgcatcgtgcgtaaaggcgaagtgcgtgtgaacaagggccggaccaagcctgaa
tataagctgcaggcaggcgatattgtgcgcattcctcctgtgcgcgtgcccgagcgcgac
gagcctgtgccggttgcgcaggcactcttgcagcgccttgaggctgcgattgtctacgaa
gacaaggcgctgatagtcctcaacaagcctgcgggtattgccgtgcatggcggcagcggt
ctgagcttcggtgtcatcgaagccttccgccagctgcgcccggacgccaaggagctcgag
ctggtgcatcgccttgatcgagacacctccggcctgctgatgattgccaaaaagcgcagc
atgttgcgccatctgcatgaggccctgcgtggcgatggcgtcgacaagcgctacatggcg
ctggttcgcggcaattgggcggctgcccagaagcaggttcgcgccccgttgctcaagagc
aatctgcgttcgggcgagcgcatggtcgaagtaaacgaggagggcaaggaggcgctgaca
atcttcaaggtgctgcgccgtttcggtgacttcgccaccatggtcgaagccaagccggtc
accggtcgtactcaccagatcagggtgcataccctgcatgcaggtcatgccattgccggt
gataccaaatatggtgacgagaacttcagtcgggaaattcgtgatctgggtggcaagcgc
ctcttcctgcatgcctacatgctgaccgtgccgatgcctgatggcagcaaattgaatgtg
caggcgcctgtcgacgagatgtgggccaggacagtggagcgtcttagtgcgtcgtga
DBGET
integrated database retrieval system
