Pseudomonas tremae: I9H09_16705
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Entry
I9H09_16705 CDS
T08237
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00541
Biosynthesis of various nucleotide sugars
ptre01100
Metabolic pathways
ptre01250
Biosynthesis of nucleotide sugars
Module
ptre_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I9H09_16705 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptre01005
]
I9H09_16705 (kdsB)
Enzymes [BR:
ptre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
I9H09_16705 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ptre01005
]
Lipid A
I9H09_16705 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
UQB35204
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Position
complement(3713891..3714655)
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AA seq
254 aa
AA seq
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MTAAFTVVIPARYGSSRFPGKPLQTIAGKPMVQLVWEQARKSSAERVVVATDDARIVEAC
RAFGAEVLLTREDHNSGTDRLAEVATQLGLAADAIVVNVQGDEPMIPPAVIDQVAANLAA
HPEAGMATLAEPIDDVAALFNPNIVKVSTDINGLALTFSRAPLPWARDALASDKDRLPAG
VPYRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVD
TPEDLERVRRLLEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcctttactgtcgtcattccggcgcgttacggctccagccggtttcccggc
aagccgttgcaaaccattgctggcaaacccatggttcagcttgtctgggaacaggcacgc
aagagcagtgccgagcgtgtagtggtggcgactgacgatgcacgcatcgtcgaggcgtgc
cgcgcatttggcgctgaagtgctgctgacccgcgaagaccacaactccggcaccgatcgc
ctggccgaggtggccacgcaactggggctggcggccgatgcgattgtggtcaatgtccag
ggcgacgaaccgatgatcccgcctgcggtgattgaccaggtggcagccaacctggctgcg
catccggaagccggcatggctaccctggccgagcctatcgatgatgtggcggcgttgttc
aatccgaacatcgtcaaggtctcgaccgacatcaacggtctggccctgaccttcagccgc
gctccgcttccgtgggcgcgggatgcgctggccagtgataaagaccggttgcctgcgggt
gtgccttaccgccgacatatcggtatctatgcctaccgtgcgggttttctgcatgacttc
gtcagctgggggccgtgctggctggaaaacaccgaaagcctcgagcaattgcgtgcgctg
tggaatggcgtgcgcattcatgtggctgacgcgcttgaagcgccgcccggcggtgtcgac
acacctgaagaccttgagcgcgtaagacgccttctggaggcttga
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