KEGG   Pseudomonas tremae: I9H09_17395
Entry
I9H09_17395       CDS       T08237                                 
Name
(GenBank) peptigoglycan-binding protein LysM
  KO
K08086  pilus assembly protein FimV
Organism
ptre  Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:ptre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptre02044]
    I9H09_17395
Secretion system [BR:ptre02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   I9H09_17395
SSDB
Motif
Pfam: FimV_N TPR_19 TPR_14 LysM DUF7491 MIPOL1_N CC4_CEP85 DUF641 Spc24 SPC25_N IPGA1_CC CFAP70_TPR_C ATG14 FAM76 FmiP_Thoc5 HH_RND_rel GAS RNA_helicase_helical CCDC110
Other DBs
NCBI-ProteinID: UQB35329
LinkDB
Position
complement(3860733..3862931)
AA seq 732 aa
MLKNSLAAVEGAGRTARAVFCKSVMAVSLLACSTLASALGLGEITLHSALNQPLNAEIEL
LETGGLSNEDVVARLASPEAFARAGIERVFFLNDLRFTPVLRGNRGVIRVVSSKPVTEPY
MSFLVQLARPNGDLLHEYTLLLDPSTSPQGLAATRSRNQRSTDTAQENRMPVAPPAAVQG
KRYTVASGDTLNGIASRLQGQGSKVSASQLADGIRLLNPQVFAGGAGSALKAGQDLLLPD
SASLPTAAAAAAPQAKPAELQRTAEQLSAAAIENQQLAQSLEALKAQTQELQEQMSGKDK
QITALRSDLALAQSAAQPLTPVTPAAPATSPAVPPAAPFQPAAVVAPGSDSFVSLPTLLA
AVLIVLLLLAFAYSKRRQRRTLAAAAPLTPDDPLIKPAQASMLPVFEVPAVAPQPNPDTT
PAPVRPAASQRQAGAAPDALDGVSIYIAYGRFSEAMGILRSALETQPQRGDIRIRLLELL
AEQGDGSGFVREEQAALEHGVDPQTIQDIRDRFPQIKAAETPIAAAFMPVAAGAATGLSF
DKVEPASTQRAQADLQPEPTAQLDETTAAALNPLPADEFQLNLDDLSMDADWDLVDPFDT
PPPRNKASATSAPAEVDPGFSSDLTQLPEVFELSDEQFLSDFSEPEIIEPVEVVMPADAG
ELSDEFLDSFMSDDADFDLLDLEEPPLSQINQAQVLIEEGEIESAREILQRVIAESDDEH
RRMARELLGRIS
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgctgaagaattccctggctgctgtcgaaggtgcgggtcgcacggcgcgcgcagtgttt
tgcaagagcgtcatggcggtctcgctgctggcctgttccaccttggcgtcagcactgggg
ctgggtgagataaccctgcattcggcgctcaatcagccgctgaatgccgagatcgagttg
ctggaaacaggcgggctgagcaacgaggacgtggttgccaggctcgcttcccctgaggcc
ttcgccagggctgggatcgaacgggtgttcttcctcaatgacctgcgcttcaccccagtg
ctgcggggcaatcgcggggttatccgggttgtgtccagcaagccggtcactgaaccttac
atgagttttctggtgcaactggcgcggcccaacggcgacctgttgcacgaatacaccctg
ctgcttgacccttccacgtccccccagggcctcgcggctacccgcagccgcaatcagcgc
tcgacggatacagcacaggaaaaccgcatgcccgttgcgccgcctgctgcggtgcagggc
aagcgttacacagtggctagtggcgacacgctgaacggtatcgccagccgcctgcaaggg
cagggcagcaaggtgtcggcgagccagttggcggatggtatccgcttgctcaacccgcaa
gtgtttgctggcggcgccgggtctgcacttaaagccggccaggacctgttgctgccggat
tcagcgtcgcttcctactgccgcagccgcagccgcaccacaagcgaagccagccgaattg
cagcgtaccgccgaacagctctcggctgcagccatcgaaaaccagcagctggcgcaatcg
ctggaagccctcaaggcgcagactcaggaacttcaagagcagatgagcggcaaggacaag
caaatcactgccttgcgcagtgatctggctctggcgcagtccgccgctcagccgcttacg
cctgtcacgcccgccgcacctgcgacatcgcctgccgtaccgcccgctgccccgtttcag
cctgcggcggtagtagcaccaggcagtgactcgttcgtcagcctgccgacactgcttgct
gctgttctgatcgtgcttctgctgctggcatttgcctattcgaaacgacgccagcgacgc
actctggctgcggcagcgccgctgacgccagatgatcctttgatcaagcctgctcaggcc
tcgatgctgccggtctttgaggtgcccgccgttgcaccgcaacccaaccctgatacaacg
cctgcgccggtaaggccggcggcgtcgcaacgccaggcgggcgcggcgcccgatgcgctg
gacggtgtcagtatctacatcgcctacgggcgtttcagcgaagctatggggattctgcgc
agcgcgctcgagacccagccgcaacgtggcgatattcgcatcaggttgctggaactgctg
gcagagcaaggcgacggcagcgggtttgtccgcgaagagcaagcggcgctcgagcacggc
gtagacccgcagaccatccaggacatccgcgaccgtttcccgcaaatcaaagccgccgaa
acccccattgcagcagccttcatgccggttgccgccggtgccgccaccgggctgtccttc
gacaaggtcgagccggcgtcgacacaacgtgctcaggccgacctgcagcccgagccgaca
gcgcaactggatgaaaccaccgctgcggccttgaaccctctgcctgccgacgaattccag
ttgaacctcgacgacctgtcgatggatgccgactgggatctggtcgacccgttcgacacc
ccgccgccgcgcaacaaggcaagtgccactagcgcgcctgccgaggtcgaccccggcttc
tcctctgacctgactcagttgccggaagtcttcgaactctcggatgaacaattcctcagc
gacttctcggagcctgaaatcatcgagcctgtcgaggtggtcatgcccgccgatgcaggc
gagctgagcgatgagttcctcgacagtttcatgagtgacgatgccgactttgacctgctg
gaccttgaagagccgccgctcagccagatcaatcaggctcaggtgctgatcgaggagggc
gagatcgagtccgcccgggaaattctgcaacgggtcattgccgagtcagacgatgagcat
cggcgtatggcgcgcgagttgctgggcaggatcagctga

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