Pseudomonas tremae: I9H09_17670
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Entry
I9H09_17670 CDS
T08237
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptre03009
]
I9H09_17670
Enzymes [BR:
ptre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I9H09_17670
Ribosome biogenesis [BR:
ptre03009
]
Prokaryotic type
rRNA helicases
I9H09_17670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UQB35380
LinkDB
All DBs
Position
complement(3919214..3920551)
Genome browser
AA seq
445 aa
AA seq
DB search
MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRK
VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM
LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN
ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVAT
DVAARGLDVEGLDMVVNFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVER
YLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKVAAKGPTKRKTVNR
PKSDLVSQDGMAPLKKRSTPAPAAE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgaattcgccctgcacgaacgcctgcttaaagctgtggccgagcttaaattt
gtcgagcctacgcctgtgcaggcggccgccattccgctcgcactgcaagggcgcgacctg
cgggtgactgcgcaaaccggcagtggcaagactgcggcctttgtgttgccgatcctcaac
cgcctgatcggcccggccaaagtacgcgtcgacattcgcgcagtgatcctgctgccgacc
cgtgagctggcgcaacagacgctcaaggaagtcgagcgtttttcccagttcaccttcgtc
aaggcaggtctgatcaccggtggcgaggacttcaaggttcaggcggcgatgttgcgcaag
gtgccggacatcctgatcggcacgccgggtcgtctgctggagcagctcaacgcaggcaac
ctcgacctcaagcacgttgaagtgctggtgctggacgaagccgaccgcatgctggacatg
ggcttttccgaggatgtcgaacgtctggcgggcgaatgcgcgggtcgcgagcagaccatg
ctgttctcggcgaccactggcggtgccggcctgcgggaaatgatcggcaaggtgctcaag
gacccacagcacctgcaagtgaacagtgtcagcgaactggcttccggcacacgccaccag
atcatcaccgctgaccacaacgttcacaaagagcaggttctgaactggttgctggccaac
gagacgtatcagaaagcaatcatcttcaccaataccaaggcaatggccgaccgtctgtat
ggccgtctggttgcgctggaatacaaggcgttcgtgctgcatggcgacaaggatcagaag
gatcgcaaggccgctatcgaccgcctgaagcagggcggtgcgaagatcatggtcgctacc
gatgtggcggcccgcggtcttgatgtcgaaggtctggacatggtggttaatttcgacatg
ccacgcagcggtgacgattacgttcaccgcgtcggccgcacaggtcgtgcaggcagcgac
ggcctggcgatctcgctgatctgtcatggcgactggaacctgatgtcgagcgttgagcgc
tacctcaagcagagcttcgagcgtcgcgtcatcaaggaagtcaaaggcacctacggcggg
ccgaagaaggtcaaggcgtcgggcaaggcggtaggcgtcaagaagaaaaagaccgacgcc
aagggcgacaagaaaaaggtagcggccaaaggccctaccaagcgcaagactgtcaaccgt
cccaagtcggatcttgtcagtcaggacggcatggcccctctgaaaaaacgcagtacgccg
gccccggctgccgagtga
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