Pseudomonas tremae: I9H09_17805
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Entry
I9H09_17805 CDS
T08237
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00061
Fatty acid biosynthesis
ptre00071
Fatty acid degradation
ptre01100
Metabolic pathways
ptre01212
Fatty acid metabolism
ptre02024
Quorum sensing
ptre04146
Peroxisome
Module
ptre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I9H09_17805
00071 Fatty acid degradation
I9H09_17805
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I9H09_17805
09145 Cellular community - prokaryotes
02024 Quorum sensing
I9H09_17805
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptre01004
]
I9H09_17805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptre04147
]
I9H09_17805
Enzymes [BR:
ptre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I9H09_17805
Lipid biosynthesis proteins [BR:
ptre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I9H09_17805
Exosome [BR:
ptre04147
]
Exosomal proteins
Exosomal proteins of breast milk
I9H09_17805
Exosomal proteins of breast cancer cells
I9H09_17805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UQB35403
LinkDB
All DBs
Position
complement(3960713..3962404)
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AA seq
563 aa
AA seq
DB search
MIENFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTHIQQVIVTEVADMLSPLKRLVINSVIKYVKKMVPAYH
LPHAIRFNEVLGKGRGQPVTEVAPGSSDVAVLQYTGGTTGIAKGAMLTHRNLIANMLQCR
ALMASNLDEGCEILITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNENFRNLDFSALKVTLSGGMALQQAAAERWKQVTDCPICEGYGM
TETSPVATVNPSQYIQMGTIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQ
RQDATDEMIGSDGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGESIKVFVVAKPGVTLTKDKVMEHMRANLTGYKVPRSVEFRDILPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaacttctggaaggataagtacccgtccggcattcctgccgatatcaacccc
gacgagtaccccaacgtccaggcggttctgaaacagtcctgccagcgtttcgctgacaaa
ccggcattcagcaatctgggcaagacgatcacgtacggcgagctgtacgagctgtccggt
gcgtttgccgcctggatccagcagcacaccgatctgcagccgggcgaccgtatcgccgtg
cagttgcccaacgtgctgcaatacccgatcgccgtcttcggtgccattcgcgccggcctg
atcgtggtcaataccaacccgctgtacaccgcgcgggaaatggaacaccagttcaatgat
tccggggccaaggcgctggtgtgcctggcaaacatggcgcatctggccgaaaaggtcgtg
cccaagacccatatacagcaggtcatcgtcactgaagtggccgatatgttgtcgccgctc
aaaaggctggtgatcaacagcgttatcaagtacgtgaagaaaatggtcccggcctatcac
ctgccgcacgccatcaggttcaacgaagtgcttggcaagggccgaggtcagccggttacc
gaagtagcgccaggcagcagcgatgttgccgtgctgcaatacaccggcggcaccaccggt
atagcaaagggcgccatgctgacccaccgcaacctcatcgccaacatgctgcaatgtcgg
gcattgatggcttccaacctggatgagggctgtgaaatcctcatcacgccgctgccgctg
tatcacatctacgcgttcacctttcactgcatggcgatgatgctgctgggcaatcacaac
atcctgatcagcaacccgcgcgatctgccggcgatggtcaaggagttgtcgaaatggaag
ttcagcggttttgtcggcctcaacaccttgtttgtggcgttgtgcaataacgagaacttt
cgcaacctcgacttctcggcgctgaaagtcactctgtcgggtggcatggccttgcagcag
gctgccgccgagcgctggaagcaggttaccgactgtcccatctgtgaaggctatggcatg
accgagaccagcccggtggcgacggtcaatccttctcaatacatccagatgggcactatc
ggcattcctgtgccgtcgacgctgtgcaaggtcatcgatgatgccggcaacgagctggcg
tttggcgagacgggcgaactgtgcatcaaaggcccgcaggtcatgaaaggctactggcag
cgtcaggatgctaccgatgaaatgatcggcagcgatggctggctcaagaccggcgacatc
gcgatcattcagcctgatggctatatccggattgtcgaccgcaagaaggacatgatcctg
atctccggcttcaacgtgtaccccaacgaactggaagacgtactcgccacacttcccggc
gtgctgcagtgcgcggccattggcgtgccggacgagaagtcgggtgaaagcatcaaggtc
tttgtcgtcgccaaaccgggcgtcacgctgaccaaggacaaggtcatggagcacatgcgc
gccaacctgaccggctataaagtgccacgcagtgtcgaattccgcgacatcctgcccacc
accaatgtcggcaagatcctgcgtcgcgagttgcgtgatgaagaactgaaaaagctgggt
gtgaagaagtaa
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