Pseudomonas tremae: I9H09_17820
Help
Entry
I9H09_17820 CDS
T08237
Name
(GenBank) type III helper protein HopAK1
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
I9H09_17820
Enzymes [BR:
ptre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
I9H09_17820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UQB39381
LinkDB
All DBs
Position
3965508..3967106
Genome browser
AA seq
532 aa
AA seq
DB search
MNMINRNYYPVSGLSNQSITPETGAHPPADLKPGHTGNQVDFSPPQRATALQSPLDTASS
RARPASSNTPESATGLLLNKLVEAIRNILKDLFPKSSAHPQDGSTHSPAQSRGEQAPNAS
QPSSSPSTTAPASPSAAQGKTEKPFVVQNDPTADKTATLPEKTAGAPSDTSNRQLKAADK
TQDTPDASETSATAPAQLKTSMSAVDRPDAAEKVARPATSAAHGPGADMSGMLGFAKEAN
TTGGNNGEVVTVNTVADLKKNMEDDTARTIRLGANLTADSKVTINFGANKTLLGTDKGNG
LHNIYLASDKNAGNDIFQNLNFTHDSRYRENGDMQMFISSGQKYWIDHNTYTGTKDQNPK
GLDKLLYVGGKADNVTLTNSKFQNNEYGAIFGQPDDSAAAKAEYKGYPRMTIADNVFSNL
DVRGPGLFRQGEFDVFNNSIDKFHLGFTATGNATILSQANYFSNGVDVSHKASNRGVLDD
YGDAHFKDIGSNVSFTQKSSTTEWTPSYNRDIKTAQEARAYDQANAGAKVLS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgatcaacagaaactattatcccgtctccggactgtcgaaccaaagcatcact
ccagagaccggcgctcacccgccagccgatctgaagcccggccatactggcaatcaagtc
gatttcagcccgccgcaacgtgcaacggcgttgcagtcaccacttgatacagccagctct
cgcgctagaccggcctcttcaaacacgccagaaagcgccactggcctgttactgaacaag
ctcgtcgaagccattcgcaacattctcaaagacctgtttccaaaatcgtcggcacatcca
caagacggctcgacgcattcgcctgcgcagtcacgaggcgaacaggcaccaaacgcttcc
caaccatcatcgtcgccttcgacaacggcccccgcatccccctcagctgcccagggcaaa
acagaaaagcctttcgtggtgcagaacgacccaacagcggacaaaactgcgacgctgcct
gaaaaaaccgcaggggcgccttctgatacgtcgaataggcaactcaaggctgctgataaa
acgcaggacacgcctgacgcgtcggagacgtcagccacggcacccgcacagctgaaaacg
tcaatgtctgccgtcgacagacctgacgcggcagaaaaggtggcaaggcccgcaacctct
gccgctcatggccctggagcggatatgtcgggcatgctcggtttcgccaaggaagcaaac
accaccggcggcaacaatggcgaggtcgtcaccgtcaataccgtggcggacctcaagaag
aatatggaagacgacaccgctcgcactattcgcctcggcgccaacctgaccgccgacagc
aaagtaaccatcaacttcggtgccaataaaaccctgctgggcaccgacaagggcaacggc
ctgcataacatctatctggccagtgacaagaacgcgggcaatgacatttttcagaacctg
aacttcacccatgacagccgttaccgtgaaaacggcgacatgcagatgttcatcagcagt
ggccagaaatactggatcgaccacaacacctacaccggcaccaaggatcagaaccccaaa
gggttggacaaacttctgtacgttggcggcaaggcagataacgtcaccctgaccaattcg
aaattccagaacaacgagtatggcgcgattttcggccagccagacgactcggcagctgcc
aaggccgagtacaagggttacccgcgaatgaccatcgccgacaacgttttcagcaacctt
gatgttcgcggacccggtctgtttcgtcagggggaatttgacgtattcaacaactcgatc
gacaaattccacctcggtttcactgcaaccgggaacgcgaccatcctgtcgcaggccaac
tatttcagcaacggcgtcgatgtttctcacaaggcaagtaatcgcggcgtgctggatgac
tatggcgatgcgcactttaaggacatcggcagcaatgtcagcttcactcagaaatcatct
acgaccgaatggacgccgagctacaaccgcgacatcaagacggcgcaagaagcgagagcc
tatgaccaggccaatgcaggcgccaaagttctgagctga
DBGET
integrated database retrieval system
