Pseudomonas tremae: I9H09_18520
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Entry
I9H09_18520 CDS
T08237
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptre03019
]
I9H09_18520 (rnc)
03009 Ribosome biogenesis [BR:
ptre03009
]
I9H09_18520 (rnc)
03036 Chromosome and associated proteins [BR:
ptre03036
]
I9H09_18520 (rnc)
Enzymes [BR:
ptre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
I9H09_18520 (rnc)
Messenger RNA biogenesis [BR:
ptre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I9H09_18520 (rnc)
Ribosome biogenesis [BR:
ptre03009
]
Eukaryotic type
90S particles
RNase
I9H09_18520 (rnc)
Prokaryotic type
rRNA processing factors
I9H09_18520 (rnc)
Chromosome and associated proteins [BR:
ptre03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
I9H09_18520 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
UQB35529
LinkDB
All DBs
Position
complement(4117157..4117846)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMILALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQG
EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtatccttgagccgccttgagcgtcagctcggctataccttcaaggatcaggag
ctgatgatcctggccctgacccatcgcagttttgccggtcgcaacaatgagcggctggaa
tttctcggcgatgcgattctcaactttgtagcgggcgaggcgttgttcgagcgttttcct
caggcgcgcgaagggcagctgtcacgtttgcgggcgcgtctggtcaagggcgaaaccctg
gcattgctggcgcgtggcttcgatctgggcgagtacctgcgtcttggctctggcgagctg
aaaagcggtggcttccgtcgtgaatccatcctggccgacgccctcgaggcgctgatcggg
gcgatctatctcgacgcaggcatggaagcggcgcgcgaacgcgtgctggcctggctgacg
accgagttcgacagccttacgctggtggacaccaacaaggaccccaagacccgactgcag
gagtttcttcagtcgcgggcctgtgatttgccgcgttacgaggtggtggatatccagggc
gagccgcattgccggacgtttttcgtcgaatgcgagatcaacctattgaatgaaaaaagc
cgaggacagggtgtcagccgccggattgccgaacaggtagccgccgcagcagcacttatc
gccctgggcgtggagaacggtcatgaatga
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