Pseudomonas tremae: I9H09_18725
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Entry
I9H09_18725 CDS
T08237
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptre03009
]
I9H09_18725
Enzymes [BR:
ptre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
I9H09_18725
Ribosome biogenesis [BR:
ptre03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
I9H09_18725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UQB35567
LinkDB
All DBs
Position
4161526..4162218
Genome browser
AA seq
230 aa
AA seq
DB search
MRLDRFLSNLPRFNRKSVRLALASGRVQVDGLTTSDPHHEVREFSCVIFDTEILQPGKAA
RYFMLHKPPGCVSATTDAQHPTVLDLLDEPDKHELHIAGRLDFNTTGLMLITNDGQWSRR
LTQPQTKMPKVYYVETEQLIDDRYVLKFAEGLYFSFENITTQPAQLNVLGPRSAHLSIVE
GRYHQVKRMFGHFDNKVLRLHRESIGALTLDPTLAAGSYRALHAAEIDLF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgatcgtttcctcagcaacttgccgcgcttcaatcgcaagagcgtacgcctg
gcccttgccagcggtcgcgttcaggtagacggactgacgacgagtgacccgcatcacgaa
gtacgcgaattcagctgtgtgatattcgacacagaaattcttcagccaggcaaagccgcg
cgttacttcatgttgcacaaaccgccaggctgcgtcagtgcaactaccgatgcgcagcac
ccgacagtgcttgatctgctggacgagcctgacaaacacgagctgcacatcgcaggacgc
ctggacttcaacaccaccgggctgatgctgatcaccaacgacgggcaatggtcacgacga
ctgactcagccgcagaccaaaatgcccaaggtgtattacgtcgagaccgagcaactcatt
gacgaccgttatgtgctgaaattcgccgaaggcctgtatttctcattcgaaaacatcacc
acacaaccggcgcaattgaacgtgctgggaccccgcagcgcacacctgagcattgtcgaa
ggccgctaccatcaagtgaaacggatgttcggccacttcgacaacaaagtgctgcggctg
caccgggaaagcatcggtgcactgaccctggacccaaccctcgcagccggcagctaccgt
gcgctgcacgcggcagaaatcgacctgttctaa
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