Pseudomonas tremae: I9H09_20360
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Entry
I9H09_20360 CDS
T08237
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_20360 (radA)
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I9H09_20360 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_16
GvpD_P-loop
AAA_22
RecA
SLFN-g3_helicase
AAA
Rad51
AAA_24
nSTAND3
AAA_14
NTPase_1
DUF7125
MCM
ABC_tran
AAA_29
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
UQB35862
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Position
complement(4518721..4520088)
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AA seq
455 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCADCGAWNTLVETMIESGAAAPPSGRTGWTGSQAQIR
TLAEVSVEEIPRFSTNSAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAQRMP
ALYVTGEESQQQVAMRARRLGLPQEKLRVMTETCIETIIATAKVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaaacgcttgtacggctgcaccgagtgtggcgcgacgtttcccaagtgg
gcgggccagtgcgctgattgcggcgcctggaacacactggtcgaaaccatgattgagagt
ggtgccgctgcgccccccagtggacgcacgggctggaccggttcgcaggcgcagatcaga
accctggcagaagtcagcgtcgaagagatcccgcgtttctccaccaactccgccgagctg
gatcgcgtgctcggtggcggtctggtagacggttcggtggtgttgatcggcggtgatccc
ggcatcggtaaatcaaccattctgcttcagacactgtgcaacattgcgcaacgcatgcct
gccctgtatgtcactggtgaggaatcccaacagcaagtggccatgcgcgcacgacgcctt
gggttgccgcaggaaaaactgcgcgtcatgaccgaaacctgcatcgagacgatcattgcc
acagccaaggtcgaaaagccgaaagtgatggtgatcgactcgatccagacgatctttacc
gaacagttgcaatccgcaccgggtggcgtatcgcaggttcgtgaaagcgccgccttgctg
gtgcgctacgccaaacaaagcggcaccgcgatctttctggtgggtcacgttaccaaggaa
ggcgcgctggccggtccacgcgtgctggagcacatggtcgacactgtgttgtatttcgaa
ggcgagtcggacggccgcctgcgcctgttgcgggccgtgaagaatcgcttcggtgccgtg
aacgagctgggcgtgttcggcatgaccgacaagggcttgaaggaagtctccaatccgtcg
gcgattttcctgacccgtgcgcaggaagaagtaccgggcagtgtggtcatggctacgtgg
gaaggtacgcgacccatgctggtggaagtccaggcactggtggatgacagccacatgtcc
aatccgcgccgggtgacactggggctcgatcaaaaccgtctggcgatgctattggccgta
ttgcaccggcatggcggcattccgacccacgatcaggacgtgttcctcaacgtggtgggt
ggcgtgaaggtgctcgagaccgcatcagacctggccttgatggcagcggtcatgtccagt
ctgcgcaataggcctctgccgcatgacctgctggtgtttggcgaagtggggttgtcgggt
gaggtcaggcccgtgcccagtggtcaggagcgcctcaaggaggccgccaagcacggtttc
aaacgggccatcgtgccgaaaggcaacgcgccgaaagaagcacctcccggcttgcaaatc
attgctgtcacgcgcctggaacaggctctggatgcgctgttcgagtaa
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