Pseudomonas tremae: I9H09_20735
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Entry
I9H09_20735 CDS
T08237
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00550
Peptidoglycan biosynthesis
ptre01100
Metabolic pathways
ptre01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I9H09_20735 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I9H09_20735 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptre01011
]
I9H09_20735 (mrdA)
Enzymes [BR:
ptre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I9H09_20735 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ptre01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I9H09_20735 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UQB35923
LinkDB
All DBs
Position
complement(4593131..4595026)
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AA seq
631 aa
AA seq
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MSQPIRLKDHEKDARLVRGRVVFGAVAVVLLVCVLIARLYYLQVIQYDYHSTLSENNRVH
VQPIPPSRGLIYDRNGVVVADNRPSFSLTMTRERSGEWSSVLDTIVEILQLTPDDRIIFE
KRMKQGRRPFEPVPILFELSEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKSLDPINYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDINLQEAAEAALGGRRGAVVALDPATGEVLAMVSAPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDSGAVTPGSRVFDPGYYQLPNY
DHKYRNWNRTGDGWVDLDTAIMRSNDTYFYDLAHKVGIDRLATYMNKFGIGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGVWNRPHL
ARTIEGKAPVDENPMPNIVLRDPANWERVNHGMQQVMHGARGTARKAAVGAQYRIAGKSG
TAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADNPKIVVAVMVENGESGSGVAAPVVR
QVLDAWLLDENGHLKPEYAGSLNLEAAAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccgatccgcctcaaagaccacgaaaaagacgcacgtctggtgcgcggcagg
gtcgtgttcggtgcagtggcggtcgtgttgctggtgtgcgtcctgatcgcgcgtctgtat
tacctgcaggtcattcagtacgactatcactcgacgctgtcggaaaacaaccgcgttcac
gttcagcctattccgcccagccgagggctgatctacgaccgcaacggcgttgtggtggca
gacaaccggcccagtttcagtctgaccatgacccgcgagcgttccggtgagtggtccagc
gtgctcgacactattgttgagatcctgcagctcacccccgatgaccggatcattttcgaa
aaacgcatgaagcaggggcgtcgtccctttgagccagtgccgatcctgttcgagctgagc
gaagagcagatcgcgctgattgcggtcaatcagttccgcctgccaggcgtcgaagtggtt
gcgcagttggtcaggcattacccgcaagggccgcactttgcccactcggtcggctacatg
gggcggatcaacgaaaaagagctcaagagcctcgatccgatcaactacagcggcacccac
catatcggcaagacgggcatcgagcgcttctacgagcctgagctgcatggtcaggtcggc
tacgaagaggtcgagaccaatgctcgtggtcgcgtgctgcgagtgctcaaacgtactgat
cccattcccggcaaggacatcgtcctgagcctggacatcaatcttcaggaagctgccgag
gccgcgcttggcgggcgtcgcggtgcagtggtggccctggaccctgctaccggagaagtg
ctggcgatggtcagcgctcccagcttcgatcccaacctgttcgtgaccggcatcagcttc
aaggcttacgccgagctgcgcgattccatcgaccggccgctgttcaaccgcattcttcgt
ggcctgtatccgccgggttcgaccatcaagcctgccgtggcaattgcagggttggactcc
ggcgctgtgacgcctggctcgcgggtattcgatccagggtattaccagttgcccaactac
gatcacaaataccgcaactggaaccgtaccggcgacggctgggtggatcttgatacagcg
atcatgcgttcaaatgacacgtacttctacgatcttgcgcacaaagtaggcattgatcgg
cttgccacctacatgaacaagtttggcatcgggcaaaaggtgtcgctggacatgttcgag
gaatcgccaggcctcatgccttcccgtgagtggaagcgcgccacgcgccgtcaggcctgg
ttccctggcgaaacgctgattctcgggatcggtcagggctacatgcaggcgacaccgcta
caactggcccaggcaactgcgctggtggccaacaaaggtgtgtggaaccgtccgcatctg
gccagaaccatcgaaggcaaggcgcctgtcgacgagaacccgatgccgaacatcgtattg
cgtgatccggccaactgggaacgcgtcaaccacggcatgcaacaggtcatgcacggtgcg
cgaggcacggcacgcaaggctgccgtcggcgcgcaataccggattgccggcaaaagcggt
acggcgcaggtcgtcgccatcaagcagggcgagaagtatgaccgcaccaaggttcaggag
cgtcaccgcgaccacgccttgttcgtggggtttgctccagccgacaaccctaaaatcgtc
gtcgcggtgatggtcgagaacggcgagtccggttccggcgttgcggcgcctgtggtgcgg
caggtcctggacgcctggctgcttgacgaaaacggccatctcaagcctgagtacgccggt
tccctgaatctggaggctgcggcccgtgaagagtaa
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