Pseudomonas tremae: I9H09_20935
Help
Entry
I9H09_20935 CDS
T08237
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ptre
Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptre03000
]
I9H09_20935 (fis)
03036 Chromosome and associated proteins [BR:
ptre03036
]
I9H09_20935 (fis)
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_20935 (fis)
Transcription factors [BR:
ptre03000
]
Prokaryotic type
Helix-turn-helix
Other families
I9H09_20935 (fis)
Chromosome and associated proteins [BR:
ptre03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
I9H09_20935 (fis)
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I9H09_20935 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
DUF6507
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UQB35962
LinkDB
All DBs
Position
4642073..4642393
Genome browser
AA seq
106 aa
AA seq
DB search
MTLMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYN
LVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgatgaccgagactttagtgagtggaacaacacccgtgagcgacaatgtcaat
ttgaaacagcacctcaacacgccgagcgaagagggtcagaccctgcgcggaagtgtcgag
aaggcgctgcacaattatttcgcccacctcgaaggcgcatccgtcactgacgtctacaac
ctggtgttgtcggaggtcgaggcgccacttcttgaaagcgttatgaactacgtgaagggc
aaccagacgaaagcctccgagctgctgggcctgaaccgaggcaccttgcgcaagaaactc
aaacagtacgatctgctttaa
DBGET
integrated database retrieval system
